RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 DIO2Q92813 273 aa12.29□□□□□ -0.44
NFIX-201ENST00000358552 Q96MT0 163 aa12.29□□□□□ -0.44
NFIX-201ENST00000358552 QRSL1Q9H0R6 528 aaKnown RBP12.29□□□□□ -0.44
NFIX-201ENST00000358552 UBQLN4Q9NRR5 601 aa12.29□□□□□ -0.44
NFIX-201ENST00000358552 ITGB1BP2Q9UKP3 347 aa12.29□□□□□ -0.44
NFIX-201ENST00000358552 PPIEQ9UNP9 301 aaKnown RBP12.29□□□□□ -0.44
NFIX-201ENST00000358552 C2orf92A0A1B0GVN3 265 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 SH3D21A4FU49 640 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 NPIPB9F8W1W9 429 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 SULT1C4O75897 302 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 HEXBP07686 556 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 HTR1AP08908 422 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 HPGDP15428 266 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 CD97P48960 835 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 FGFBP1Q14512 234 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 TRIM16LQ309B1 348 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 VWA2Q5GFL6 755 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 CCNJQ5T5M9 372 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 C1orf189Q5VU69 101 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 PWWP2BQ6NUJ5 590 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 PGBD2Q6P3X8 592 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 PODNL1Q6PEZ8 512 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 ZNF730Q6ZMV8 503 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 ADCK1Q86TW2 530 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 RBM45Q8IUH3 476 aaKnown RBP12.28□□□□□ -0.44
NFIX-201ENST00000358552 LACC1Q8IV20 430 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 CDK20Q8IZL9 346 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 CENPSQ8N2Z9 138 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 SLC43A2Q8N370 569 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 LSMEM1Q8N8F7 131 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 SIMC1Q8NDZ2 872 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 OR4K5Q8NGD3 323 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 OR8K3Q8NH51 312 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 ZNF721Q8TF20 911 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 ATOH1Q92858 354 aaPredicted RBP12.28□□□□□ -0.44
NFIX-201ENST00000358552 YIPF6Q96EC8 236 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 SLC41A3Q96GZ6 507 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 SH3YL1Q96HL8 342 aaPredicted RBP12.28□□□□□ -0.44
NFIX-201ENST00000358552 RSPO3Q9BXY4 272 aaPredicted RBP12.28□□□□□ -0.44
NFIX-201ENST00000358552 FAM117AQ9C073 453 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 OR8D2Q9GZM6 311 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 IMPAD1Q9NX62 359 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 SELENONQ9NZV5 590 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 RHCGQ9UBD6 479 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 TMEM5Q9Y2B1 443 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 SCN2AQ99250 2005 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 GXYLT2A0PJZ3 443 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 SAGE2PA6NJ88 616 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 MEN1O00255 615 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 SEMA7AO75326 666 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 DDAH2O95865 285 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 NGFRP08138 427 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 ACVR2AP27037 513 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 UGT2B10P36537 528 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 NBL1P41271 181 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 STAT5AP42229 794 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 GP2P55259 537 aaKnown RBP12.28□□□□□ -0.44
NFIX-201ENST00000358552 TSPAN31Q12999 210 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 CTF1Q16619 201 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 ZNF385CQ66K41 422 aaPredicted RBP12.28□□□□□ -0.44
NFIX-201ENST00000358552 RPL13AP3Q6NVV1 102 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 SLC16A12Q6ZSM3 486 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 B3GNT8Q7Z7M8 397 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 SLCO6A1Q86UG4 719 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 SLC15A4Q8N697 577 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 BCORP1Q8N888 145 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 OR9Q2Q8NGE9 314 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 OR5L2Q8NGL0 311 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 C9orf43Q8TAL5 461 aaPredicted RBP12.28□□□□□ -0.44
NFIX-201ENST00000358552 RNF217Q8TC41 542 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.28□□□□□ -0.44
NFIX-201ENST00000358552 NIPSNAP1Q9BPW8 284 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 ITPAQ9BY32 194 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 GPN3Q9UHW5 284 aaPredicted RBP12.28□□□□□ -0.44
NFIX-201ENST00000358552 CHST2Q9Y4C5 530 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 PCDHGA6Q9Y5G7 932 aa12.28□□□□□ -0.44
NFIX-201ENST00000358552 SNTNA6NMZ2 147 aa12.27□□□□□ -0.45
NFIX-201ENST00000358552 ZAR1LA6NP61 321 aa12.27□□□□□ -0.45
NFIX-201ENST00000358552 SCDO00767 359 aa12.27□□□□□ -0.45
NFIX-201ENST00000358552 LRP3O75074 770 aa12.27□□□□□ -0.45
NFIX-201ENST00000358552 ALOX12BO75342 701 aa12.27□□□□□ -0.45
NFIX-201ENST00000358552 CLPSP04118 112 aa12.27□□□□□ -0.45
NFIX-201ENST00000358552 RBM34P42696 430 aaKnown RBP12.27□□□□□ -0.45
NFIX-201ENST00000358552 BCAP31P51572 246 aa12.27□□□□□ -0.45
NFIX-201ENST00000358552 EMP2P54851 167 aa12.27□□□□□ -0.45
NFIX-201ENST00000358552 NRG3P56975 720 aa12.27□□□□□ -0.45
NFIX-201ENST00000358552 COPZ1P61923 177 aa12.27□□□□□ -0.45
NFIX-201ENST00000358552 KRR1Q13601 381 aaKnown RBP12.27□□□□□ -0.45
NFIX-201ENST00000358552 PTGES3Q15185 160 aaKnown RBP12.27□□□□□ -0.45
NFIX-201ENST00000358552 UBE2UQ5VVX9 321 aa12.27□□□□□ -0.45
NFIX-201ENST00000358552 LAIR2Q6ISS4 152 aa12.27□□□□□ -0.45
NFIX-201ENST00000358552 KLHL17Q6TDP4 642 aa12.27□□□□□ -0.45
NFIX-201ENST00000358552 NPSR1Q6W5P4 371 aa12.27□□□□□ -0.45
NFIX-201ENST00000358552 MBOAT2Q6ZWT7 520 aa12.27□□□□□ -0.45
NFIX-201ENST00000358552 COX15Q7KZN9 410 aa12.27□□□□□ -0.45
NFIX-201ENST00000358552 CLDN22Q8N7P3 220 aa12.27□□□□□ -0.45
NFIX-201ENST00000358552 RHOXF1Q8NHV9 184 aa12.27□□□□□ -0.45
NFIX-201ENST00000358552 DNAJA4Q8WW22 397 aaPredicted RBP12.27□□□□□ -0.45
NFIX-201ENST00000358552 GTPBP3Q969Y2 492 aaKnown RBP12.27□□□□□ -0.45
NFIX-201ENST00000358552 ADIPOR1Q96A54 375 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms