RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 TJAP1Q5JTD0 557 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 ARL9Q6T311 187 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 MTSS1LQ765P7 747 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 GHDCQ8N2G8 530 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 OR10H4Q8NGA5 316 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 PFN4Q8NHR9 129 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 CD180Q99467 661 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 C20orf141Q9NUB4 165 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 ZMIZ1Q9ULJ6 1067 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 NCKAP1Q9Y2A7 1128 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 C7orf66A4D0T2 115 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 MT-ND5P03915 603 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 RPS4Y1P22090 263 aaKnown RBP22.78■■□□□ 1.24
CPNE1-202ENST00000352393 AHCYP23526 432 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 ACSL1P33121 698 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 P2RX3P56373 397 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 CAMK1Q14012 370 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 TRAM1Q15629 374 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 CST6Q15828 149 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 ADGRD2Q7Z7M1 963 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 TPRA1Q86W33 373 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 GPR135Q8IZ08 494 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 CMC2Q9NRP2 79 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 SLC17A4Q9Y2C5 497 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 CACNG2Q9Y698 323 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 PAK4O96013 591 aaPredicted RBP22.77■■□□□ 1.24
CPNE1-202ENST00000352393 ZNF888P0CJ79 500 aaPredicted RBP22.77■■□□□ 1.24
CPNE1-202ENST00000352393 E2F1Q01094 437 aa22.77■■□□□ 1.24
CPNE1-202ENST00000352393 DGLUCYQ7Z3D6 616 aa22.77■■□□□ 1.24
CPNE1-202ENST00000352393 PAQR7Q86WK9 346 aa22.77■■□□□ 1.24
CPNE1-202ENST00000352393 RNF113BQ8IZP6 322 aaKnown RBP22.77■■□□□ 1.24
CPNE1-202ENST00000352393 SP7Q8TDD2 431 aaPredicted RBP22.77■■□□□ 1.24
CPNE1-202ENST00000352393 ARMC5Q96C12 935 aa22.77■■□□□ 1.24
CPNE1-202ENST00000352393 SDF2Q99470 211 aa22.77■■□□□ 1.24
CPNE1-202ENST00000352393 ZNF350Q9GZX5 532 aa22.77■■□□□ 1.24
CPNE1-202ENST00000352393 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.77■■□□□ 1.245e-12■■■■□ 21.5
CPNE1-202ENST00000352393 PIGUQ9H490 435 aa22.77■■□□□ 1.24
CPNE1-202ENST00000352393 SC5DO75845 299 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 IFI30P13284 250 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 FCN2Q15485 313 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 MAPK14Q16539 360 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 CCNJQ5T5M9 372 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 BCL2L15Q5TBC7 163 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 HACD4Q5VWC8 232 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 PXKQ7Z7A4 578 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 HDDC3Q8N4P3 179 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 DTX3Q8N9I9 347 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 TMEM239Q8WW34 195 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 ASB16Q96NS5 453 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 NDC1Q9BTX1 674 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 ATP13A2Q9NQ11 1180 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 SLC22A31A6NKX4 558 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 EEF1E1O43324 174 aaKnown RBP22.76■■□□□ 1.23
CPNE1-202ENST00000352393 REM1O75628 298 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 DBPQ10586 325 aaPredicted RBP22.76■■□□□ 1.23
CPNE1-202ENST00000352393 KLHL12Q53G59 568 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 GARNL3Q5VVW2 1013 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 FAM205BPQ63HN1 556 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 THSD4Q6ZMP0 1018 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 GPALPP1Q8IXQ4 340 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 ANGPTL6Q8NI99 470 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 PTP4A1Q93096 173 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 COL26A1Q96A83 441 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 SCMH1Q96GD3 660 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 ABHD1Q96SE0 405 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 IL23AQ9NPF7 189 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 CLDND1Q9NY35 253 aa22.76■■□□□ 1.23
CPNE1-202ENST00000352393 SOX30O94993 753 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 BMP7P18075 431 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 PDGFRLQ15198 375 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 GPR68Q15743 365 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 PYHIN1Q6K0P9 492 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 RPL13AP3Q6NVV1 102 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 TRMT10AQ8TBZ6 339 aaKnown RBP22.75■■□□□ 1.23
CPNE1-202ENST00000352393 HSD17B8Q92506 261 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 RSPH9Q9H1X1 276 aaPredicted RBP22.75■■□□□ 1.23
CPNE1-202ENST00000352393 GHITMQ9H3K2 345 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 KIR3DX1Q9H7L2 352 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 FAM86C2PA6NEL3 165 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 SLC9B1P1A6NJY1 282 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 NARSO43776 548 aaKnown RBP22.75■■□□□ 1.23
CPNE1-202ENST00000352393 KCNJ13O60928 360 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 IL9P15248 144 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 TAS2R43P59537 309 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 FOXK2Q01167 660 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 OR1Q1Q15612 314 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 NTRK2Q16620 822 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 FAM209AQ5JX71 171 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 CEACAM19Q7Z692 300 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 ASPGQ86U10 573 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 ZNF619Q8N2I2 560 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 C17orf47Q8NEP4 570 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 ABHD4Q8TB40 342 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 NT5CQ8TCD5 201 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 PGLYRP3Q96LB9 341 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 MED28Q9H204 178 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 KCMF1Q9P0J7 381 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 SLC23A1Q9UHI7 598 aa22.75■■□□□ 1.23
CPNE1-202ENST00000352393 A0A1B0GVC2 190 aa22.74■■□□□ 1.23
CPNE1-202ENST00000352393 A6NIN4 97 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms