RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 ACBD7Q8N6N7 88 aa20.52■□□□□ 0.88
UPF3A-201ENST00000351487 ATP6V1C2Q8NEY4 427 aa20.52■□□□□ 0.88
UPF3A-201ENST00000351487 OR51G2Q8NGK0 314 aa20.52■□□□□ 0.88
UPF3A-201ENST00000351487 HDHD5Q9BXW7 423 aa20.52■□□□□ 0.88
UPF3A-201ENST00000351487 C14orf105Q9NVL8 296 aa20.52■□□□□ 0.88
UPF3A-201ENST00000351487 RCBTB2O95199 551 aa20.51■□□□□ 0.87
UPF3A-201ENST00000351487 CT62P0C5K7 136 aa20.51■□□□□ 0.87
UPF3A-201ENST00000351487 RPS5P46782 204 aaKnown RBP20.51■□□□□ 0.87
UPF3A-201ENST00000351487 CAV3P56539 151 aa20.51■□□□□ 0.87
UPF3A-201ENST00000351487 POU6F2P78424 691 aaPredicted RBP20.51■□□□□ 0.87
UPF3A-201ENST00000351487 EXOSC7Q15024 291 aaKnown RBP20.51■□□□□ 0.87
UPF3A-201ENST00000351487 TAB1Q15750 504 aa20.51■□□□□ 0.87
UPF3A-201ENST00000351487 BCL2A1Q16548 175 aa20.51■□□□□ 0.87
UPF3A-201ENST00000351487 PRPF38BQ5VTL8 546 aaKnown RBP20.51■□□□□ 0.87
UPF3A-201ENST00000351487 TMEM92Q6UXU6 159 aa20.51■□□□□ 0.87
UPF3A-201ENST00000351487 Q6ZSR6 202 aa20.51■□□□□ 0.87
UPF3A-201ENST00000351487 CSNK1A1LQ8N752 337 aa20.51■□□□□ 0.87
UPF3A-201ENST00000351487 SYNDIG1Q9H7V2 258 aa20.51■□□□□ 0.87
UPF3A-201ENST00000351487 ATP13A2Q9NQ11 1180 aa20.51■□□□□ 0.87
UPF3A-201ENST00000351487 HS3ST3A1Q9Y663 406 aa20.51■□□□□ 0.87
UPF3A-201ENST00000351487 SHISA3A0PJX4 238 aa20.51■□□□□ 0.87
UPF3A-201ENST00000351487 C10orf142B7Z368 130 aa20.51■□□□□ 0.87
UPF3A-201ENST00000351487 FUT1P19526 365 aa20.51■□□□□ 0.87
UPF3A-201ENST00000351487 CTBP2P56545 445 aa20.51■□□□□ 0.87
UPF3A-201ENST00000351487 RSBN1Q5VWQ0 802 aaPredicted RBP20.51■□□□□ 0.87
UPF3A-201ENST00000351487 ZNF613Q6PF04 617 aa20.51■□□□□ 0.87
UPF3A-201ENST00000351487 FIGNL1Q6PIW4 674 aa20.51■□□□□ 0.87
UPF3A-201ENST00000351487 METAP1DQ6UB28 335 aaPredicted RBP20.51■□□□□ 0.87
UPF3A-201ENST00000351487 KLBQ86Z14 1044 aa20.51■□□□□ 0.87
UPF3A-201ENST00000351487 KISS1RQ969F8 398 aaPredicted RBP20.51■□□□□ 0.87
UPF3A-201ENST00000351487 ATF6BQ99941 703 aa20.51■□□□□ 0.87
UPF3A-201ENST00000351487 ENKD1Q9H0I2 346 aa20.51■□□□□ 0.87
UPF3A-201ENST00000351487 CMC2Q9NRP2 79 aa20.51■□□□□ 0.87
UPF3A-201ENST00000351487 C12orf71A8MTZ7 269 aa20.5■□□□□ 0.87
UPF3A-201ENST00000351487 NKX2-2O95096 273 aa20.5■□□□□ 0.87
UPF3A-201ENST00000351487 HLA-DQB1P01920 261 aa20.5■□□□□ 0.87
UPF3A-201ENST00000351487 RNF144AP50876 292 aaPredicted RBP20.5■□□□□ 0.87
UPF3A-201ENST00000351487 TFF2Q03403 129 aa20.5■□□□□ 0.87
UPF3A-201ENST00000351487 ADAM15Q13444 863 aa20.5■□□□□ 0.87
UPF3A-201ENST00000351487 TMEM31Q5JXX7 168 aa20.5■□□□□ 0.87
UPF3A-201ENST00000351487 ANKRD9Q96BM1 317 aaPredicted RBP20.5■□□□□ 0.87
UPF3A-201ENST00000351487 TIMP4Q99727 224 aa20.5■□□□□ 0.87
UPF3A-201ENST00000351487 SIGLEC7Q9Y286 467 aa20.5■□□□□ 0.87
UPF3A-201ENST00000351487 MED31Q9Y3C7 131 aa20.5■□□□□ 0.87
UPF3A-201ENST00000351487 PTBP1P26599 531 aaKnown RBP eCLIP20.5■□□□□ 0.87
UPF3A-201ENST00000351487 GABRA3P34903 492 aa20.5■□□□□ 0.87
UPF3A-201ENST00000351487 AMZ1Q400G9 498 aa20.5■□□□□ 0.87
UPF3A-201ENST00000351487 PYDC2Q56P42 97 aa20.5■□□□□ 0.87
UPF3A-201ENST00000351487 SLC35F1Q5T1Q4 408 aa20.5■□□□□ 0.87
UPF3A-201ENST00000351487 TMEM91Q6ZNR0 172 aa20.5■□□□□ 0.87
UPF3A-201ENST00000351487 BPIFA2Q96DR5 249 aa20.5■□□□□ 0.87
UPF3A-201ENST00000351487 ZNF559Q9BR84 538 aa20.5■□□□□ 0.87
UPF3A-201ENST00000351487 ALG8Q9BVK2 526 aa20.5■□□□□ 0.87
UPF3A-201ENST00000351487 C11orf54Q9H0W9 315 aaPredicted RBP20.5■□□□□ 0.87
UPF3A-201ENST00000351487 PPP1R3EQ9H7J1 279 aa20.5■□□□□ 0.87
UPF3A-201ENST00000351487 HRASLS2Q9NWW9 162 aa20.5■□□□□ 0.87
UPF3A-201ENST00000351487 COMMD3Q9UBI1 195 aa20.5■□□□□ 0.87
UPF3A-201ENST00000351487 ZNF221Q9UK13 617 aa20.5■□□□□ 0.87
UPF3A-201ENST00000351487 PIAS3Q9Y6X2 628 aa20.5■□□□□ 0.87
UPF3A-201ENST00000351487 GXYLT2A0PJZ3 443 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 FAM86C2PA6NEL3 165 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 HCN1O60741 890 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 TNFP01375 233 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 TRAPPC2P0DI81 140 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 TRAPPC2BP0DI82 140 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 BMP8BP34820 402 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 RAB38P57729 211 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 DLX2Q07687 328 aaPredicted RBP20.49■□□□□ 0.87
UPF3A-201ENST00000351487 BMP8AQ7Z5Y6 402 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 ABI3BPQ7Z7G0 1075 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 CDK20Q8IZL9 346 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 OTULINQ96BN8 352 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 ISG20L2Q9H9L3 353 aaKnown RBP20.49■□□□□ 0.87
UPF3A-201ENST00000351487 NEK6Q9HC98 313 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 INPP5EQ9NRR6 644 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 RANBP2P49792 3224 aaKnown RBP20.49■□□□□ 0.87
UPF3A-201ENST00000351487 KIR2DS5A0A0G2JLQ3 304 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 A0A0G2JNG1 304 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 A8MU76 341 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 KIR2DS3K7RE56 304 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 RNF13O43567 381 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 CBX7O95931 251 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 KRT8P05787 483 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 DRD5P21918 477 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 RIN1Q13671 783 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 KIR2DS5Q14953 304 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 CNIH2Q6PI25 160 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 SMARCD3Q6STE5 483 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 THSD4Q6ZMP0 1018 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 RDH10Q8IZV5 341 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 SLC22A18ASQ8N1D0 253 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 OR13H1Q8NG92 308 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 OR13C2Q8NGS9 318 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 ZNF486Q96H40 463 aaPredicted RBP20.49■□□□□ 0.87
UPF3A-201ENST00000351487 HCAR1Q9BXC0 346 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 GSDMCQ9BYG8 508 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 RNF32Q9H0A6 362 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 MED20Q9H944 212 aa20.49■□□□□ 0.87
UPF3A-201ENST00000351487 MEPEQ9NQ76 525 aaPredicted RBP20.49■□□□□ 0.87
UPF3A-201ENST00000351487 BABAM2Q9NXR7 383 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms