RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 TIMP3P35625 211 aa19.97■□□□□ 0.79
SNX3-202ENST00000349379 MDH1P40925 334 aaKnown RBP19.97■□□□□ 0.79
SNX3-202ENST00000349379 SUMO3P55854 103 aaPredicted RBP19.97■□□□□ 0.79
SNX3-202ENST00000349379 MAPK11Q15759 364 aa19.97■□□□□ 0.79
SNX3-202ENST00000349379 MAPK14Q16539 360 aa19.97■□□□□ 0.79
SNX3-202ENST00000349379 PLPPR5Q32ZL2 321 aa19.97■□□□□ 0.79
SNX3-202ENST00000349379 AGKQ53H12 422 aa19.97■□□□□ 0.79
SNX3-202ENST00000349379 METTL21CQ5VZV1 264 aa19.97■□□□□ 0.79
SNX3-202ENST00000349379 ZNF619Q8N2I2 560 aa19.97■□□□□ 0.79
SNX3-202ENST00000349379 AURKBQ96GD4 344 aaPredicted RBP19.97■□□□□ 0.79
SNX3-202ENST00000349379 TRNT1Q96Q11 434 aaKnown RBP19.97■□□□□ 0.79
SNX3-202ENST00000349379 TUBA1CQ9BQE3 449 aa19.97■□□□□ 0.79
SNX3-202ENST00000349379 TMEM120AQ9BXJ8 343 aa19.97■□□□□ 0.79
SNX3-202ENST00000349379 SLC38A1Q9H2H9 487 aa19.97■□□□□ 0.79
SNX3-202ENST00000349379 MED17Q9NVC6 651 aa19.97■□□□□ 0.79
SNX3-202ENST00000349379 Q9UFV3 132 aa19.97■□□□□ 0.79
SNX3-202ENST00000349379 VDAC3Q9Y277 283 aa19.97■□□□□ 0.79
SNX3-202ENST00000349379 ZNF337Q9Y3M9 751 aa19.97■□□□□ 0.79
SNX3-202ENST00000349379 GMEB1Q9Y692 573 aa19.97■□□□□ 0.79
SNX3-202ENST00000349379 MBD3L4A6NDZ8 208 aaPredicted RBP19.96■□□□□ 0.79
SNX3-202ENST00000349379 MBD3L3A6NE82 208 aaPredicted RBP19.96■□□□□ 0.79
SNX3-202ENST00000349379 MBD3L5A6NJ08 208 aaPredicted RBP19.96■□□□□ 0.79
SNX3-202ENST00000349379 FAM47E-STBD1D6RA91 191 aa19.96■□□□□ 0.79
SNX3-202ENST00000349379 PRSS44E7EML9 344 aa19.96■□□□□ 0.79
SNX3-202ENST00000349379 HCRTR2O43614 444 aa19.96■□□□□ 0.79
SNX3-202ENST00000349379 GMFGO60234 142 aa19.96■□□□□ 0.79
SNX3-202ENST00000349379 LINGO3P0C6S8 592 aa19.96■□□□□ 0.79
SNX3-202ENST00000349379 TROVE2P10155 538 aaKnown RBP eCLIP19.96■□□□□ 0.79
SNX3-202ENST00000349379 PEPDP12955 493 aa19.96■□□□□ 0.79
SNX3-202ENST00000349379 GRNP28799 593 aaKnown RBP19.96■□□□□ 0.79
SNX3-202ENST00000349379 P2RX1P51575 399 aa19.96■□□□□ 0.79
SNX3-202ENST00000349379 CLDN15P56746 228 aa19.96■□□□□ 0.79
SNX3-202ENST00000349379 CHRNEQ04844 493 aa19.96■□□□□ 0.79
SNX3-202ENST00000349379 SYPL1Q16563 259 aa19.96■□□□□ 0.79
SNX3-202ENST00000349379 PAGE3Q5JUK9 113 aa19.96■□□□□ 0.79
SNX3-202ENST00000349379 LRRC74BQ6ZQY2 392 aa19.96■□□□□ 0.79
SNX3-202ENST00000349379 CCDC71Q8IV32 467 aaPredicted RBP19.96■□□□□ 0.79
SNX3-202ENST00000349379 MSRB3Q8IXL7 192 aa19.96■□□□□ 0.79
SNX3-202ENST00000349379 GTPBP8Q8N3Z3 284 aaPredicted RBP19.96■□□□□ 0.79
SNX3-202ENST00000349379 ANKFN1Q8N957 763 aa19.96■□□□□ 0.79
SNX3-202ENST00000349379 OR5M1Q8NGP8 315 aa19.96■□□□□ 0.79
SNX3-202ENST00000349379 LILRB4Q8NHJ6 448 aa19.96■□□□□ 0.79
SNX3-202ENST00000349379 MBD3L2Q8NHZ7 208 aaPredicted RBP19.96■□□□□ 0.79
SNX3-202ENST00000349379 ZBTB8AQ96BR9 441 aa19.96■□□□□ 0.79
SNX3-202ENST00000349379 NPAS1Q99742 590 aa19.96■□□□□ 0.79
SNX3-202ENST00000349379 CALHM2Q9HA72 323 aa19.96■□□□□ 0.79
SNX3-202ENST00000349379 SLC25A37Q9NYZ2 338 aa19.96■□□□□ 0.79
SNX3-202ENST00000349379 CARD8Q9Y2G2 431 aa19.96■□□□□ 0.79
SNX3-202ENST00000349379 L3MBTL1Q9Y468 752 aa19.96■□□□□ 0.79
SNX3-202ENST00000349379 TRBV5-3A0A0A0MS03 114 aa19.95■□□□□ 0.78
SNX3-202ENST00000349379 A0A1W2PP18 115 aa19.95■□□□□ 0.78
SNX3-202ENST00000349379 ZNF264O43296 627 aa19.95■□□□□ 0.78
SNX3-202ENST00000349379 EIF4E2O60573 245 aaKnown RBP19.95■□□□□ 0.78
SNX3-202ENST00000349379 DNAJA2O60884 412 aa19.95■□□□□ 0.78
SNX3-202ENST00000349379 H6PDO95479 791 aa19.95■□□□□ 0.78
SNX3-202ENST00000349379 CHRM4P08173 479 aa19.95■□□□□ 0.78
SNX3-202ENST00000349379 NCF2P19878 526 aaPredicted RBP19.95■□□□□ 0.78
SNX3-202ENST00000349379 HTR1EP28566 365 aa19.95■□□□□ 0.78
SNX3-202ENST00000349379 RNF144AP50876 292 aaPredicted RBP19.95■□□□□ 0.78
SNX3-202ENST00000349379 FGFBP1Q14512 234 aa19.95■□□□□ 0.78
SNX3-202ENST00000349379 NDUFAF6Q330K2 333 aa19.95■□□□□ 0.78
SNX3-202ENST00000349379 GPAT3Q53EU6 434 aa19.95■□□□□ 0.78
SNX3-202ENST00000349379 ZNF614Q8N883 585 aa19.95■□□□□ 0.78
SNX3-202ENST00000349379 FAM71CQ8NEG0 241 aa19.95■□□□□ 0.78
SNX3-202ENST00000349379 TOR1AIP2Q8NFQ8 470 aa19.95■□□□□ 0.78
SNX3-202ENST00000349379 POC1BQ8TC44 478 aa19.95■□□□□ 0.78
SNX3-202ENST00000349379 CA5BP1Q8WTZ4 195 aa19.95■□□□□ 0.78
SNX3-202ENST00000349379 ZG16BQ96DA0 208 aa19.95■□□□□ 0.78
SNX3-202ENST00000349379 ARSGQ96EG1 525 aa19.95■□□□□ 0.78
SNX3-202ENST00000349379 ZNF317Q96PQ6 595 aaPredicted RBP19.95■□□□□ 0.78
SNX3-202ENST00000349379 RUBCNLQ9H714 662 aa19.95■□□□□ 0.78
SNX3-202ENST00000349379 SLAMF8Q9P0V8 285 aa19.95■□□□□ 0.78
SNX3-202ENST00000349379 CLCF1Q9UBD9 225 aa19.95■□□□□ 0.78
SNX3-202ENST00000349379 AP4B1Q9Y6B7 739 aa19.95■□□□□ 0.78
SNX3-202ENST00000349379 SHISA8B8ZZ34 492 aa19.94■□□□□ 0.78
SNX3-202ENST00000349379 H0Y3Z8 333 aa19.94■□□□□ 0.78
SNX3-202ENST00000349379 VIMP08670 466 aaKnown RBP19.94■□□□□ 0.78
SNX3-202ENST00000349379 UBL4AP11441 157 aa19.94■□□□□ 0.78
SNX3-202ENST00000349379 BMP2P12643 396 aa19.94■□□□□ 0.78
SNX3-202ENST00000349379 ETFAP13804 333 aa19.94■□□□□ 0.78
SNX3-202ENST00000349379 RPS4Y1P22090 263 aaKnown RBP19.94■□□□□ 0.78
SNX3-202ENST00000349379 ZNF41P51814 821 aaPredicted RBP19.94■□□□□ 0.78
SNX3-202ENST00000349379 HPCAP84074 193 aa19.94■□□□□ 0.78
SNX3-202ENST00000349379 SRYQ05066 204 aa19.94■□□□□ 0.78
SNX3-202ENST00000349379 SKP2Q13309 424 aa19.94■□□□□ 0.78
SNX3-202ENST00000349379 NAXEQ8NCW5 288 aa19.94■□□□□ 0.78
SNX3-202ENST00000349379 TNIP2Q8NFZ5 429 aa19.94■□□□□ 0.78
SNX3-202ENST00000349379 OR10Q1Q8NGQ4 319 aa19.94■□□□□ 0.78
SNX3-202ENST00000349379 TSPEARQ8WU66 669 aa19.94■□□□□ 0.78
SNX3-202ENST00000349379 TRIB1Q96RU8 372 aa19.94■□□□□ 0.78
SNX3-202ENST00000349379 LAT2Q9GZY6 243 aa19.94■□□□□ 0.78
SNX3-202ENST00000349379 PKDREJQ9NTG1 2253 aa19.93■□□□□ 0.78
SNX3-202ENST00000349379 CLCA1A8K7I4 914 aa19.93■□□□□ 0.78
SNX3-202ENST00000349379 CLIC1O00299 241 aa19.93■□□□□ 0.78
SNX3-202ENST00000349379 ETV2O00321 342 aaPredicted RBP19.93■□□□□ 0.78
SNX3-202ENST00000349379 POU3F2P20265 443 aaPredicted RBP19.93■□□□□ 0.78
SNX3-202ENST00000349379 PGM1P36871 562 aa19.93■□□□□ 0.78
SNX3-202ENST00000349379 SUCLG1P53597 346 aaKnown RBP19.93■□□□□ 0.78
SNX3-202ENST00000349379 DSTNP60981 165 aa19.93■□□□□ 0.78
SNX3-202ENST00000349379 PLAURQ03405 335 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms