RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 UGT2B11O75310 529 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 TNFSF15O95150 251 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 CLIC3O95833 236 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 CSTAP01040 98 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 LYNP07948 512 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 F8A1P23610 371 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 EPHA2P29317 976 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 IFNA8P32881 189 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 FOLR3P41439 243 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 CLK3P49761 638 aaKnown RBP10.08□□□□□ -0.8
ECM1-201ENST00000346569 RNF144AP50876 292 aaPredicted RBP10.08□□□□□ -0.8
ECM1-201ENST00000346569 CHN2P52757 468 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 TAS2R41P59536 307 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 LSM11P83369 360 aaKnown RBP eCLIP10.08□□□□□ -0.8
ECM1-201ENST00000346569 FGD3Q5JSP0 725 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 PLAG1Q6DJT9 500 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 C1orf94Q6P1W5 598 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 PGBD2Q6P3X8 592 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 LYPD8Q6UX82 237 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 C16orf47Q6ZP98 133 aaPredicted RBP10.08□□□□□ -0.8
ECM1-201ENST00000346569 ZNF550Q7Z398 422 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 GALNT5Q7Z7M9 940 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 RANBP3LQ86VV4 465 aaPredicted RBP10.08□□□□□ -0.8
ECM1-201ENST00000346569 PARP8Q8N3A8 854 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 ESX1Q8N693 406 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 ZNF527Q8NB42 609 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 OR4K5Q8NGD3 323 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 RNF138Q8WVD3 245 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 SLC38A4Q969I6 547 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 ZNF559Q9BR84 538 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 GABARAPL3Q9BY60 117 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 REV1Q9UBZ9 1251 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 TESQ9UGI8 421 aaKnown RBP10.08□□□□□ -0.8
ECM1-201ENST00000346569 POFUT2Q9Y2G5 429 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 ORC6Q9Y5N6 252 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 ZFHX4Q86UP3 3567 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 TRBV11-1A0A0K0K1C0 115 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 ICOSLGO75144 302 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 PPM1BO75688 479 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 ADAP00813 363 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 TP53P04637 393 aaPredicted RBP10.07□□□□□ -0.8
ECM1-201ENST00000346569 CDH2P19022 906 aaPredicted RBP10.07□□□□□ -0.8
ECM1-201ENST00000346569 RYKP34925 604 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 KRT20P35900 424 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 RPS6KA3P51812 740 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 ISL1P61371 349 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 RPS18P62269 152 aaKnown RBP10.07□□□□□ -0.8
ECM1-201ENST00000346569 MYBPC1Q00872 1141 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 PLCXD2Q0VAA5 305 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 COX10Q12887 443 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 FOXD4Q12950 439 aaPredicted RBP10.07□□□□□ -0.8
ECM1-201ENST00000346569 CD226Q15762 336 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 EXT1Q16394 746 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 RSPO4Q2I0M5 234 aaPredicted RBP10.07□□□□□ -0.8
ECM1-201ENST00000346569 ZNF613Q6PF04 617 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 KLHL17Q6TDP4 642 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 LINC00114Q6XXX2 140 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 PLEKHM3Q6ZWE6 761 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 NDUFAF7Q7L592 441 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 PRICKLE2Q7Z3G6 844 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 PPP1R32Q7Z5V6 425 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 ZNF440Q8IYI8 595 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 NLGN4XQ8N0W4 816 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 ARMC10Q8N2F6 343 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 ZNF614Q8N883 585 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 POGLUT1Q8NBL1 392 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 AQP11Q8NBQ7 271 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 ZNF555Q8NEP9 628 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 NLGN4YQ8NFZ3 816 aaPredicted RBP10.07□□□□□ -0.8
ECM1-201ENST00000346569 ACOT11Q8WXI4 607 aaPredicted RBP10.07□□□□□ -0.8
ECM1-201ENST00000346569 HRASLS5Q96KN8 279 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 GPA33Q99795 319 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 GPR87Q9BY21 358 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 DEFB126Q9BYW3 111 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 RTN4RQ9BZR6 473 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 TRIM2Q9C040 744 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 POLR1BQ9H9Y6 1135 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 TMEM27Q9HBJ8 222 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 MMP25Q9NPA2 562 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 EXOSC3Q9NQT5 275 aaKnown RBP10.07□□□□□ -0.8
ECM1-201ENST00000346569 PAPOLBQ9NRJ5 636 aaKnown RBP10.07□□□□□ -0.8
ECM1-201ENST00000346569 MYOTQ9UBF9 498 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 PCDHGA6Q9Y5G7 932 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 SDK2Q58EX2 2172 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 A0A0B4J2E0 115 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 LOC101059948A0A1B0GTJ6 334 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 A0A1B0GX12 115 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 CDRT15L2A8MXV6 281 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 C21orf140B9A014 251 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.07□□□□□ -0.8
ECM1-201ENST00000346569 WWP2O00308 870 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 SCDO00767 359 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 OIP5O43482 229 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 OR10H3O60404 316 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 UBTFL6P0CB48 400 aaPredicted RBP10.07□□□□□ -0.8
ECM1-201ENST00000346569 SDHBP21912 280 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 IL12BP29460 328 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 STAT5AP42229 794 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 OMPP47874 163 aa10.07□□□□□ -0.8
ECM1-201ENST00000346569 NRG3P56975 720 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms