RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 ZNF844Q08AG5 666 aa15.98■□□□□ 0.15
CKLF-202ENST00000345436 PDCD2Q16342 344 aaPredicted RBP15.98■□□□□ 0.15
CKLF-202ENST00000345436 EXOSC6Q5RKV6 272 aaKnown RBP15.98■□□□□ 0.15
CKLF-202ENST00000345436 ANXA8L1Q5VT79 327 aa15.98■□□□□ 0.15
CKLF-202ENST00000345436 HBMQ6B0K9 141 aa15.98■□□□□ 0.15
CKLF-202ENST00000345436 TGIF2LYQ8IUE0 185 aa15.98■□□□□ 0.15
CKLF-202ENST00000345436 RIMKLAQ8IXN7 391 aa15.98■□□□□ 0.15
CKLF-202ENST00000345436 LRRC34Q8IZ02 419 aa15.98■□□□□ 0.15
CKLF-202ENST00000345436 LILRA2Q8N149 483 aa15.98■□□□□ 0.15
CKLF-202ENST00000345436 KRTCAP2Q8N6L1 136 aa15.98■□□□□ 0.15
CKLF-202ENST00000345436 OR10D3Q8NH80 312 aa15.98■□□□□ 0.15
CKLF-202ENST00000345436 OTUB1Q96FW1 271 aaPredicted RBP15.98■□□□□ 0.15
CKLF-202ENST00000345436 RNF145Q96MT1 663 aa15.98■□□□□ 0.15
CKLF-202ENST00000345436 OPN3Q9H1Y3 402 aaPredicted RBP15.98■□□□□ 0.15
CKLF-202ENST00000345436 LIME1Q9H400 295 aa15.98■□□□□ 0.15
CKLF-202ENST00000345436 CXorf36Q9H7Y0 433 aa15.98■□□□□ 0.15
CKLF-202ENST00000345436 DTNAQ9Y4J8 743 aa15.98■□□□□ 0.15
CKLF-202ENST00000345436 GPC6Q9Y625 555 aaPredicted RBP15.98■□□□□ 0.15
CKLF-202ENST00000345436 RNASET2O00584 256 aaKnown RBP15.97■□□□□ 0.15
CKLF-202ENST00000345436 EIF4E2O60573 245 aaKnown RBP15.97■□□□□ 0.15
CKLF-202ENST00000345436 IL11P20809 199 aa15.97■□□□□ 0.15
CKLF-202ENST00000345436 MATN1P21941 496 aa15.97■□□□□ 0.15
CKLF-202ENST00000345436 SLC1A6P48664 564 aa15.97■□□□□ 0.15
CKLF-202ENST00000345436 CLNS1AP54105 237 aaKnown RBP15.97■□□□□ 0.15
CKLF-202ENST00000345436 STX3Q13277 289 aa15.97■□□□□ 0.15
CKLF-202ENST00000345436 KLHL26Q53HC5 615 aa15.97■□□□□ 0.15
CKLF-202ENST00000345436 ATAD3BQ5T9A4 648 aa15.97■□□□□ 0.15
CKLF-202ENST00000345436 GGNQ86UU5 652 aa15.97■□□□□ 0.15
CKLF-202ENST00000345436 ZNF610Q8N9Z0 462 aa15.97■□□□□ 0.15
CKLF-202ENST00000345436 TOR1AIP2Q8NFQ8 470 aa15.97■□□□□ 0.15
CKLF-202ENST00000345436 OSTF1Q92882 214 aa15.97■□□□□ 0.15
CKLF-202ENST00000345436 KLHL15Q96M94 604 aa15.97■□□□□ 0.15
CKLF-202ENST00000345436 PLEKHF2Q9H8W4 249 aa15.97■□□□□ 0.15
CKLF-202ENST00000345436 PLSCR4Q9NRQ2 329 aa15.97■□□□□ 0.15
CKLF-202ENST00000345436 GPATCH2Q9NW75 528 aa15.97■□□□□ 0.15
CKLF-202ENST00000345436 FBXO34Q9NWN3 711 aa15.97■□□□□ 0.15
CKLF-202ENST00000345436 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.97■□□□□ 0.15
CKLF-202ENST00000345436 V9GYY5 206 aaPredicted RBP15.97■□□□□ 0.15
CKLF-202ENST00000345436 SHISA8B8ZZ34 492 aa15.96■□□□□ 0.15
CKLF-202ENST00000345436 CXCL13O43927 109 aa15.96■□□□□ 0.15
CKLF-202ENST00000345436 ZNF500O60304 480 aaPredicted RBP15.96■□□□□ 0.15
CKLF-202ENST00000345436 STX11O75558 287 aa15.96■□□□□ 0.15
CKLF-202ENST00000345436 HBA1P69905 142 aa15.96■□□□□ 0.15
CKLF-202ENST00000345436 RNPS1Q15287 305 aaKnown RBP15.96■□□□□ 0.15
CKLF-202ENST00000345436 POU4F3Q15319 338 aa15.96■□□□□ 0.15
CKLF-202ENST00000345436 DPY19L1Q2PZI1 675 aa15.96■□□□□ 0.15
CKLF-202ENST00000345436 DEFB113Q30KQ7 82 aa15.96■□□□□ 0.15
CKLF-202ENST00000345436 CEP85LQ5SZL2 805 aa15.96■□□□□ 0.15
CKLF-202ENST00000345436 HHATQ5VTY9 493 aa15.96■□□□□ 0.15
CKLF-202ENST00000345436 ZNF474Q6S9Z5 364 aaPredicted RBP15.96■□□□□ 0.15
CKLF-202ENST00000345436 BEND4Q6ZU67 534 aa15.96■□□□□ 0.15
CKLF-202ENST00000345436 C6orf120Q7Z4R8 191 aa15.96■□□□□ 0.15
CKLF-202ENST00000345436 ZAR1Q86SH2 424 aa15.96■□□□□ 0.15
CKLF-202ENST00000345436 ZNF614Q8N883 585 aa15.96■□□□□ 0.15
CKLF-202ENST00000345436 OR8J2Q8NGG1 315 aa15.96■□□□□ 0.15
CKLF-202ENST00000345436 OIT3Q8WWZ8 545 aa15.96■□□□□ 0.15
CKLF-202ENST00000345436 CPNE4Q96A23 557 aaPredicted RBP15.96■□□□□ 0.15
CKLF-202ENST00000345436 PKNOX2Q96KN3 472 aa15.96■□□□□ 0.15
CKLF-202ENST00000345436 WFIKKN1Q96NZ8 548 aa15.96■□□□□ 0.15
CKLF-202ENST00000345436 OR7D2Q96RA2 312 aa15.96■□□□□ 0.15
CKLF-202ENST00000345436 KLHL4Q9C0H6 718 aa15.96■□□□□ 0.15
CKLF-202ENST00000345436 AKTIPQ9H8T0 292 aa15.96■□□□□ 0.15
CKLF-202ENST00000345436 BEX4Q9NWD9 120 aaPredicted RBP15.96■□□□□ 0.15
CKLF-202ENST00000345436 KLHL28Q9NXS3 571 aa15.96■□□□□ 0.15
CKLF-202ENST00000345436 MPDZO75970 2070 aa15.96■□□□□ 0.15
CKLF-202ENST00000345436 PRSS51A0A1B0GVH4 220 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 ZNF195O14628 629 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 TNFSF11O14788 317 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 ZNF264O43296 627 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 ARHGEF9O43307 516 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 SS18L1O75177 396 aaPredicted RBP15.95■□□□□ 0.14
CKLF-202ENST00000345436 AQP8O94778 261 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 ATE1O95260 518 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 CGAP01215 116 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 LINGO3P0C6S8 592 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 LBPP18428 481 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 FPR1P21462 350 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 ARRB2P32121 409 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 ANXA11P50995 505 aaKnown RBP15.95■□□□□ 0.14
CKLF-202ENST00000345436 CBFBQ13951 182 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 EXOC3L2Q2M3D2 409 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 TMEM201Q5SNT2 666 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 C16orf62Q7Z3J2 963 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 TMCO5AQ8N6Q1 288 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 ZNF781Q8N8C0 355 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 OR4A15Q8NGL6 344 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 PIGTQ969N2 578 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 SLC35G5Q96KT7 338 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 MRGPRX4Q96LA9 322 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 PAIP2Q9BPZ3 127 aaKnown RBP15.95■□□□□ 0.14
CKLF-202ENST00000345436 TACO1Q9BSH4 297 aaKnown RBP15.95■□□□□ 0.14
CKLF-202ENST00000345436 TMUB1Q9BVT8 246 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 NMUR2Q9GZQ4 415 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 SERINC1Q9NRX5 453 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 RAB21Q9UL25 225 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 CARD8Q9Y2G2 431 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 KIAA1549Q9HCM3 1950 aa15.95■□□□□ 0.14
CKLF-202ENST00000345436 RNF103-CHMP3A0A140T963 221 aa15.94■□□□□ 0.14
CKLF-202ENST00000345436 ITM2AO43736 263 aa15.94■□□□□ 0.14
CKLF-202ENST00000345436 UBL4AP11441 157 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms