RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 SLC35A3Q9Y2D2 325 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 SCN3AQ9NY46 2000 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 REV3LO60673 3130 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 TRBV23OR9-2A0A075B6M9 112 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 FAM86C2PA6NEL3 165 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 EFCAB7A8K855 629 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 HRO43593 1189 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 PIP5K1CO60331 668 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 APOA1P02647 267 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 CSF2P04141 144 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 CD1AP06126 327 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 ST6GAL1P15907 406 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 ADH7P40394 386 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 EMDP50402 254 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 FUT7Q11130 342 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 POU4F2Q12837 409 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 ZNHIT3Q15649 155 aaPredicted RBP9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 PRPF38BQ5VTL8 546 aaKnown RBP9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 ARMC6Q6NXE6 501 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 NUP54Q7Z3B4 507 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 BMP8AQ7Z5Y6 402 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 TAF8Q7Z7C8 310 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 SNX29P2Q8IUI4 249 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 GALNT12Q8IXK2 581 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 GPR151Q8TDV0 419 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 PATE1Q8WXA2 126 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 KISS1RQ969F8 398 aaPredicted RBP9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 KLHDC7BQ96G42 594 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 POM121Q96HA1 1249 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 AHCYL2Q96HN2 611 aaKnown RBP9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 SAMD8Q96LT4 415 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 CCDC3Q9BQI4 270 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 G6PC3Q9BUM1 346 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 LRRC61Q9BV99 259 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 KATNB1Q9BVA0 655 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 TCEAL2Q9H3H9 227 aaPredicted RBP9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 FOLH1BQ9HBA9 442 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 DNAJB12Q9NXW2 375 aaKnown RBP9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 NTNG1Q9Y2I2 539 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 GPR52Q9Y2T5 361 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 CLDN16Q9Y5I7 305 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 H0YIG0 161 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 PLD2O14939 933 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 FOXS1O43638 330 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 CDRT1O95170 752 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 PVRP15151 417 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 NME1P15531 152 aaKnown RBP9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 MAKP20794 623 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 SLC2A5P22732 501 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 GABRA3P34903 492 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 ACAA2P42765 397 aaKnown RBP9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 CAPZBP47756 277 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 HSD17B7P56937 341 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 VSX2P58304 361 aaPredicted RBP9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 PPP3R1P63098 170 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 MLLT1Q03111 559 aaPredicted RBP9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 TFF2Q03403 129 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 ZNF79Q15937 498 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 DDI2Q5TDH0 399 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 OR2G6Q5TZ20 316 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 MCATQ8IVS2 390 aaKnown RBP9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 GPALPP1Q8IXQ4 340 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 FAM83FQ8NEG4 500 aaPredicted RBP9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 OR5T3Q8NGG3 340 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 HMGB4Q8WW32 186 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 EFHD2Q96C19 240 aaPredicted RBP9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 BPIFA2Q96DR5 249 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 SLC19A3Q9BZV2 496 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 FAM60AQ9NP50 221 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 H2AFY2Q9P0M6 372 aaPredicted RBP9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 TNFRSF10DQ9UBN6 386 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 EPHA6Q9UF33 1036 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 CARD8Q9Y2G2 431 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 MTCH2Q9Y6C9 303 aa9.92□□□□□ -0.82
TRAF3IP2-201ENST00000340026 COL5A1P20908 1838 aaPredicted RBP9.91□□□□□ -0.82
TRAF3IP2-201ENST00000340026 PEX12O00623 359 aa9.91□□□□□ -0.82
TRAF3IP2-201ENST00000340026 PRAMEF2O60811 474 aa9.91□□□□□ -0.82
TRAF3IP2-201ENST00000340026 CHRNB1P11230 501 aa9.91□□□□□ -0.82
TRAF3IP2-201ENST00000340026 PRG2P13727 222 aa9.91□□□□□ -0.82
TRAF3IP2-201ENST00000340026 CTSEP14091 401 aa9.91□□□□□ -0.82
TRAF3IP2-201ENST00000340026 LCN1P31025 176 aa9.91□□□□□ -0.82
TRAF3IP2-201ENST00000340026 GPR3P46089 330 aa9.91□□□□□ -0.82
TRAF3IP2-201ENST00000340026 TAS2R43P59537 309 aa9.91□□□□□ -0.82
TRAF3IP2-201ENST00000340026 RPS25P62851 125 aaKnown RBP9.91□□□□□ -0.82
TRAF3IP2-201ENST00000340026 FABP5Q01469 135 aa9.91□□□□□ -0.82
TRAF3IP2-201ENST00000340026 ASAH1Q13510 395 aa9.91□□□□□ -0.82
TRAF3IP2-201ENST00000340026 CCNJQ5T5M9 372 aa9.91□□□□□ -0.82
TRAF3IP2-201ENST00000340026 VASNQ6EMK4 673 aa9.91□□□□□ -0.82
TRAF3IP2-201ENST00000340026 GDPD3Q7L5L3 318 aa9.91□□□□□ -0.82
TRAF3IP2-201ENST00000340026 ZNF440Q8IYI8 595 aa9.91□□□□□ -0.82
TRAF3IP2-201ENST00000340026 ACBD7Q8N6N7 88 aa9.91□□□□□ -0.82
TRAF3IP2-201ENST00000340026 OR52R1Q8NGF1 315 aa9.91□□□□□ -0.82
TRAF3IP2-201ENST00000340026 GATAD2BQ8WXI9 593 aa9.91□□□□□ -0.82
TRAF3IP2-201ENST00000340026 ACOT12Q8WYK0 555 aa9.91□□□□□ -0.82
TRAF3IP2-201ENST00000340026 MFRPQ9BY79 579 aa9.91□□□□□ -0.82
TRAF3IP2-201ENST00000340026 MIXL1Q9H2W2 232 aa9.91□□□□□ -0.82
TRAF3IP2-201ENST00000340026 ZNF229Q9UJW7 825 aa9.91□□□□□ -0.82
TRAF3IP2-201ENST00000340026 ITGB1BP2Q9UKP3 347 aa9.91□□□□□ -0.82
TRAF3IP2-201ENST00000340026 ICAM5Q9UMF0 924 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms