RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 IL20RAQ9UHF4 553 aa12.96□□□□□ -0.34
SF1-202ENST00000334944 GPR52Q9Y2T5 361 aa12.96□□□□□ -0.34
SF1-202ENST00000334944 GSAPA4D1B5 854 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 ZNF860A6NHJ4 632 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 MAN2B1O00754 1011 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 TLX2O43763 284 aaPredicted RBP12.95□□□□□ -0.34
SF1-202ENST00000334944 POLR2GP62487 172 aaKnown RBP eCLIP12.95□□□□□ -0.34
SF1-202ENST00000334944 GPR176Q14439 515 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 FAM209BQ5JX69 171 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 OR2G6Q5TZ20 316 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 PGBD2Q6P3X8 592 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 PIAS4Q8N2W9 510 aaPredicted RBP12.95□□□□□ -0.34
SF1-202ENST00000334944 RAB42Q8N4Z0 105 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 SUN3Q8TAQ9 357 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 ZNF607Q96SK3 696 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 NELL2Q99435 816 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 MAPKAP1Q9BPZ7 522 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 GSX2Q9BZM3 304 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 SAP130Q9H0E3 1048 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 PCBD2Q9H0N5 130 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 GHITMQ9H3K2 345 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 TMEM74BQ9NUR3 256 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 CLN6Q9NWW5 311 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 HPF1Q9NWY4 346 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 P2RX2Q9UBL9 471 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 FBXL2Q9UKC9 423 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 A4GNTQ9UNA3 340 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 GPR55Q9Y2T6 319 aaPredicted RBP12.95□□□□□ -0.34
SF1-202ENST00000334944 hCG_1807616A0A1W2PRN6 198 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 PROM1O43490 865 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 TRIM3O75382 744 aaPredicted RBP12.95□□□□□ -0.34
SF1-202ENST00000334944 APOC3P02656 99 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 ASGR2P07307 311 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 RPS21P63220 83 aaKnown RBP12.95□□□□□ -0.34
SF1-202ENST00000334944 CSTF1Q05048 431 aaKnown RBP12.95□□□□□ -0.34
SF1-202ENST00000334944 DSG2Q14126 1118 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 ITPRIPL2Q3MIP1 535 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 ENPP7Q6UWV6 458 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 USP30Q70CQ3 517 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 COQ8AQ8NI60 647 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 KLHL6Q8WZ60 621 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 SMAD5Q99717 465 aaKnown RBP12.95□□□□□ -0.34
SF1-202ENST00000334944 FNDC11Q9BVV2 318 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 RANBP3Q9H6Z4 567 aaPredicted RBP12.95□□□□□ -0.34
SF1-202ENST00000334944 PPP1R3EQ9H7J1 279 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 PRDM7Q9NQW5 492 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 KCND3Q9UK17 655 aa12.95□□□□□ -0.34
SF1-202ENST00000334944 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.94□□□□□ -0.34
SF1-202ENST00000334944 PTP4A3O75365 173 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 DNASE1P24855 282 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 ATP5A1P25705 553 aaKnown RBP12.94□□□□□ -0.34
SF1-202ENST00000334944 NTSP30990 170 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 ADPRHP54922 357 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 KIAA1024LP59773 190 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 DLX2Q07687 328 aaPredicted RBP12.94□□□□□ -0.34
SF1-202ENST00000334944 CLEC12AQ5QGZ9 265 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 ABHD17CQ6PCB6 329 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 IL20RBQ6UXL0 311 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 SHFQ7M4L6 423 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 VRK2Q86Y07 508 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 OR10G6Q8NH81 332 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 PTP4A1Q93096 173 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 MSLNLQ96KJ4 702 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 TMEM43Q9BTV4 400 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 APOOQ9BUR5 198 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 SHARPINQ9H0F6 387 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 MTIF3Q9H2K0 278 aaKnown RBP12.94□□□□□ -0.34
SF1-202ENST00000334944 NKX2-4Q9H2Z4 354 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 EGLN3Q9H6Z9 239 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 SLC30A4O14863 429 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 CASKO14936 926 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 FCMRO60667 390 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 CLEC3AO75596 197 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 OSMP13725 252 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 MMP11P24347 488 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 HSD17B2P37059 387 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 KIR2DL1P43626 348 aaPredicted RBP12.94□□□□□ -0.34
SF1-202ENST00000334944 ZSWIM7Q19AV6 140 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 ATAT1Q5SQI0 421 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 MLIPQ5VWP3 458 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 ZNF776Q68DI1 518 aaPredicted RBP12.94□□□□□ -0.34
SF1-202ENST00000334944 ZER1Q7Z7L7 766 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 TBC1D19Q8N5T2 526 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 FAM46DQ8NEK8 389 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 OR4K5Q8NGD3 323 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 C9orf43Q8TAL5 461 aaPredicted RBP12.94□□□□□ -0.34
SF1-202ENST00000334944 LCN9Q8WX39 176 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 PATE1Q8WXA2 126 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 TM9SF4Q92544 642 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 SENP5Q96HI0 755 aaPredicted RBP12.94□□□□□ -0.34
SF1-202ENST00000334944 NPAS1Q99742 590 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 C1QTNF2Q9BXJ5 285 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 CNIH4Q9P003 139 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 ASB4Q9Y574 426 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 FAM74A7A6NL05 159 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 CPSF4LA6NMK7 179 aaKnown RBP12.94□□□□□ -0.34
SF1-202ENST00000334944 PRKYO43930 277 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 KDM4BO94953 1096 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 PPP2R1BP30154 601 aa12.94□□□□□ -0.34
SF1-202ENST00000334944 COL28A1Q2UY09 1125 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms