RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 PLCXD2Q0VAA5 305 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 TRAPPC6BQ86SZ2 158 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 OSTM1Q86WC4 334 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 BPIFB2Q8N4F0 458 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 SDR9C7Q8NEX9 313 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 MRPL38Q96DV4 380 aaKnown RBP9.26□□□□□ -0.93
COL4A6-201ENST00000334504 RBMXL1Q96E39 390 aaKnown RBP9.26□□□□□ -0.93
COL4A6-201ENST00000334504 RADILQ96JH8 1075 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 ZNF582Q96NG8 517 aaPredicted RBP9.26□□□□□ -0.93
COL4A6-201ENST00000334504 ZNF587Q96SQ5 575 aaPredicted RBP9.26□□□□□ -0.93
COL4A6-201ENST00000334504 C20orf24Q9BUV8 137 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 TXLNGYQ9BZA5 131 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 B4GALT6Q9UBX8 382 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 PGAP2Q9UHJ9 254 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 FAM72CH0Y354 149 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 PGCP20142 388 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 DDCP20711 480 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 HNF1BP35680 557 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 MLLT11Q13015 90 aaPredicted RBP9.26□□□□□ -0.93
COL4A6-201ENST00000334504 HTR4Q13639 388 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 RAB33AQ14088 237 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 ARL6IP1Q15041 203 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 FAM72AQ5TYM5 149 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 FAM72DQ6L9T8 149 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 FAM72BQ86X60 149 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 ADAMTS14Q8WXS8 1223 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 SEC22AQ96IW7 307 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 INTS14Q96SY0 518 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 OR52A5Q9H2C5 316 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 EMC7Q9NPA0 242 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 MRPL22Q9NWU5 206 aaKnown RBP9.26□□□□□ -0.93
COL4A6-201ENST00000334504 MROH2AA6NES4 1674 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 LILRB3O75022 631 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 SLC10A2Q12908 348 aaPredicted RBP9.25□□□□□ -0.93
COL4A6-201ENST00000334504 GAREM2Q75VX8 874 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 MCATQ8IVS2 390 aaKnown RBP9.25□□□□□ -0.93
COL4A6-201ENST00000334504 FRMD1Q8N878 549 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 RNF141Q8WVD5 230 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 C11orf49Q9H6J7 331 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 CNOT2Q9NZN8 540 aaKnown RBP9.25□□□□□ -0.93
COL4A6-201ENST00000334504 ZNF487B1APH4 448 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 PIM1P11309 404 aaPredicted RBP9.25□□□□□ -0.93
COL4A6-201ENST00000334504 GDI1P31150 447 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 TNK1Q13470 666 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 OR52W1Q6IF63 320 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 PSAPL1Q6NUJ1 521 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 CREB3L4Q8TEY5 395 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 MARC2Q969Z3 335 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 C10orf90Q96M02 699 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 SYT17Q9BSW7 474 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 KLHL13Q9P2N7 655 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 CPNE7Q9UBL6 633 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 CA14Q9ULX7 337 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 EDDM13A0A1B0GTR0 161 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 ADH5P11766 374 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 SMPD1P17405 629 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 PCGF2P35227 344 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 KIAA1024LP59773 190 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 ADARB1P78563 741 aaKnown RBP9.25□□□□□ -0.93
COL4A6-201ENST00000334504 TBCEQ15813 527 aaPredicted RBP9.25□□□□□ -0.93
COL4A6-201ENST00000334504 NXPE4Q6UWF7 544 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 ZNF574Q6ZN55 896 aaPredicted RBP9.25□□□□□ -0.93
COL4A6-201ENST00000334504 OR10Z1Q8NGY1 313 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 ST8SIA4Q92187 359 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 SLC35B4Q969S0 331 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 ELF4Q99607 663 aaPredicted RBP9.25□□□□□ -0.93
COL4A6-201ENST00000334504 SORBS1Q9BX66 1292 aaKnown RBP9.25□□□□□ -0.93
COL4A6-201ENST00000334504 I6L893 689 aaPredicted RBP9.25□□□□□ -0.93
COL4A6-201ENST00000334504 SMN1Q16637 294 aaKnown RBP9.25□□□□□ -0.93
COL4A6-201ENST00000334504 FBXW12Q6X9E4 464 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 OR4N5Q8IXE1 308 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 KREMEN2Q8NCW0 462 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 MIB2Q96AX9 1013 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 TRMT2BQ96GJ1 504 aaKnown RBP9.25□□□□□ -0.93
COL4A6-201ENST00000334504 SAP130Q9H0E3 1048 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 SDHAF2Q9NX18 166 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 CXXC1Q9P0U4 656 aaPredicted RBP9.25□□□□□ -0.93
COL4A6-201ENST00000334504 GAB2Q9UQC2 676 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 FBXO7Q9Y3I1 522 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 C2orf78A6NCI8 922 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 DPM1O60762 260 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 KCNK2O95069 426 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 CPNE6O95741 557 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 TFAP2AP05549 437 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 DRD2P14416 443 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 DLX2Q07687 328 aaPredicted RBP9.25□□□□□ -0.93
COL4A6-201ENST00000334504 HABP2Q14520 560 aaPredicted RBP9.25□□□□□ -0.93
COL4A6-201ENST00000334504 SFRP5Q5T4F7 317 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 PIP5KL1Q5T9C9 394 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 HEPHL1Q6MZM0 1159 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 PDZD3Q86UT5 571 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 MFSD6LQ8IWD5 586 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 NANPQ8TBE9 248 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 ZFAND1Q8TCF1 268 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 IMP4Q96G21 291 aaKnown RBP9.25□□□□□ -0.93
COL4A6-201ENST00000334504 IL17FQ96PD4 163 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 ZNF300Q96RE9 604 aaPredicted RBP9.25□□□□□ -0.93
COL4A6-201ENST00000334504 C11orf54Q9H0W9 315 aaPredicted RBP9.25□□□□□ -0.93
COL4A6-201ENST00000334504 HRH3Q9Y5N1 445 aa9.25□□□□□ -0.93
COL4A6-201ENST00000334504 TMEM82A0PJX8 343 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms