RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 GATAD2BQ8WXI9 593 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 ARSGQ96EG1 525 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 RBM18Q96H35 190 aaKnown RBP16.11■□□□□ 0.17
DDX28-201ENST00000332395 NELL2Q99435 816 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 CD180Q99467 661 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 ATP13A2Q9NQ11 1180 aa16.11■□□□□ 0.17
DDX28-201ENST00000332395 SOX30O94993 753 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 FUT1P19526 365 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 DRD5P21918 477 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 FXYD6P3P58550 94 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 MAT1AQ00266 395 aaKnown RBP16.1■□□□□ 0.17
DDX28-201ENST00000332395 ZNF181Q2M3W8 571 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 GKN2Q86XP6 184 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 ZNF614Q8N883 585 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 OR4F15Q8NGB8 312 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 CNOT9Q92600 299 aaKnown RBP16.1■□□□□ 0.17
DDX28-201ENST00000332395 SLC38A3Q99624 504 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 BARHL1Q9BZE3 327 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 MOV10Q9HCE1 1003 aaKnown RBP16.1■□□□□ 0.17
DDX28-201ENST00000332395 C14orf105Q9NVL8 296 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 FBXL21Q9UKT6 434 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 MRPS33Q9Y291 106 aaKnown RBP16.1■□□□□ 0.17
DDX28-201ENST00000332395 A0A1W2PR77 199 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 HRKO00198 91 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 STK25O00506 426 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 CTDSP2O14595 271 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 HRO43593 1189 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 CTNSO60931 367 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 HTR1FP30939 366 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 SSTR4P31391 388 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 ETV6P41212 452 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 SLC1A3P43003 542 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 LRIT3Q3SXY7 679 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 SPANXN2Q5MJ10 180 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 C6orf183Q5T699 404 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 OR4N2Q8NGD1 307 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 TMEM203Q969S6 136 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 HS6ST2Q96MM7 605 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 ZNF559Q9BR84 538 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 UCK1Q9HA47 277 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 ISYNA1Q9NPH2 558 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 HINT3Q9NQE9 182 aaKnown RBP16.1■□□□□ 0.17
DDX28-201ENST00000332395 TXNL4BQ9NX01 149 aaKnown RBP16.1■□□□□ 0.17
DDX28-201ENST00000332395 CRNNQ9UBG3 495 aaPredicted RBP16.1■□□□□ 0.17
DDX28-201ENST00000332395 CBLCQ9ULV8 474 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 UGT2A1Q9Y4X1 527 aa16.1■□□□□ 0.17
DDX28-201ENST00000332395 PNMA8CA0A1B0GUJ8 204 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 LILRA5A6NI73 299 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 METTL12A8MUP2 240 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 TCEA1P23193 301 aaKnown RBP16.09■□□□□ 0.17
DDX28-201ENST00000332395 MAOBP27338 520 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 RORCP51449 518 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 TPBGQ13641 420 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 ERV3-1Q14264 604 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 AMZ1Q400G9 498 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 STEAP3Q658P3 488 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 ZNF613Q6PF04 617 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 NANOGNBQ7Z5D8 188 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 CCDC190Q86UF4 302 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 LHFPL3Q86UP9 236 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 CPOQ8IVL8 374 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 ZNF595Q8IYB9 648 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 OR52L1Q8NGH7 329 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 GRHL3Q8TE85 626 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 HTRA1Q92743 480 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 VSTM2LQ96N03 204 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 ARHGAP9Q9BRR9 750 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 TMEM27Q9HBJ8 222 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 SMURF1Q9HCE7 757 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 PRTFDC1Q9NRG1 225 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 SNTG1Q9NSN8 517 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 NOX1Q9Y5S8 564 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 PLD2O14939 933 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 SNPHO15079 494 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 NSA2O95478 260 aaKnown RBP16.09■□□□□ 0.17
DDX28-201ENST00000332395 IGKV1D-16P01601 117 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 TBXA2RP21731 343 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 CD79BP40259 229 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 PPM1FP49593 454 aaPredicted RBP16.09■□□□□ 0.17
DDX28-201ENST00000332395 IGLV3-21P80748 117 aaPredicted RBP16.09■□□□□ 0.17
DDX28-201ENST00000332395 DSG2Q14126 1118 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 FAM53BQ14153 422 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 PLK5Q496M5 336 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 CXXC5Q7LFL8 322 aaKnown RBP16.09■□□□□ 0.17
DDX28-201ENST00000332395 ZNF485Q8NCK3 441 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 FAM83FQ8NEG4 500 aaPredicted RBP16.09■□□□□ 0.17
DDX28-201ENST00000332395 UFD1Q92890 307 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 BPIFA2Q96DR5 249 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.09■□□□□ 0.17
DDX28-201ENST00000332395 H2AFY2Q9P0M6 372 aaPredicted RBP16.09■□□□□ 0.17
DDX28-201ENST00000332395 EXOGQ9Y2C4 368 aaKnown RBP16.09■□□□□ 0.17
DDX28-201ENST00000332395 DTX4Q9Y2E6 619 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 YARS2Q9Y2Z4 477 aaKnown RBP16.09■□□□□ 0.17
DDX28-201ENST00000332395 MED31Q9Y3C7 131 aa16.09■□□□□ 0.17
DDX28-201ENST00000332395 A0A0B4J2E0 115 aa16.08■□□□□ 0.16
DDX28-201ENST00000332395 A0A1B0GX12 115 aa16.08■□□□□ 0.16
DDX28-201ENST00000332395 BLACEA4D250 179 aa16.08■□□□□ 0.16
DDX28-201ENST00000332395 FAM183AA6NL82 134 aa16.08■□□□□ 0.16
DDX28-201ENST00000332395 BHLHE40O14503 412 aa16.08■□□□□ 0.16
DDX28-201ENST00000332395 SOCS6O14544 535 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms