RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 GLI4P10075 376 aa13.42□□□□□ -0.26
CLRN1-203ENST00000328863 NR2F1P10589 423 aa13.42□□□□□ -0.26
CLRN1-203ENST00000328863 ELK4P28324 431 aa13.42□□□□□ -0.26
CLRN1-203ENST00000328863 EIF1P41567 113 aaKnown RBP13.42□□□□□ -0.26
CLRN1-203ENST00000328863 LHX2P50458 406 aa13.42□□□□□ -0.26
CLRN1-203ENST00000328863 CRISP3P54108 245 aa13.42□□□□□ -0.26
CLRN1-203ENST00000328863 EEFSECP57772 596 aaKnown RBP13.42□□□□□ -0.26
CLRN1-203ENST00000328863 PMPCAQ10713 525 aa13.42□□□□□ -0.26
CLRN1-203ENST00000328863 CBFBQ13951 182 aa13.42□□□□□ -0.26
CLRN1-203ENST00000328863 PLPPR5Q32ZL2 321 aa13.42□□□□□ -0.26
CLRN1-203ENST00000328863 COX20Q5RI15 118 aa13.42□□□□□ -0.26
CLRN1-203ENST00000328863 LRIF1Q5T3J3 769 aa13.42□□□□□ -0.26
CLRN1-203ENST00000328863 NSUN5P2Q63ZY6 315 aa13.42□□□□□ -0.26
CLRN1-203ENST00000328863 RTL6Q6ICC9 239 aa13.42□□□□□ -0.26
CLRN1-203ENST00000328863 ARSKQ6UWY0 536 aa13.42□□□□□ -0.26
CLRN1-203ENST00000328863 LRRC74BQ6ZQY2 392 aa13.42□□□□□ -0.26
CLRN1-203ENST00000328863 CHMP1BQ7LBR1 199 aa13.42□□□□□ -0.26
CLRN1-203ENST00000328863 ZPLD1Q8TCW7 415 aa13.42□□□□□ -0.26
CLRN1-203ENST00000328863 SMPDL3BQ92485 455 aa13.42□□□□□ -0.26
CLRN1-203ENST00000328863 AURKBQ96GD4 344 aaPredicted RBP13.42□□□□□ -0.26
CLRN1-203ENST00000328863 TRIB1Q96RU8 372 aa13.42□□□□□ -0.26
CLRN1-203ENST00000328863 PAIP1Q9H074 479 aaKnown RBP13.42□□□□□ -0.26
CLRN1-203ENST00000328863 SLC6A13Q9NSD5 602 aa13.42□□□□□ -0.26
CLRN1-203ENST00000328863 MED17Q9NVC6 651 aa13.42□□□□□ -0.26
CLRN1-203ENST00000328863 KLHL14Q9P2G3 628 aa13.42□□□□□ -0.26
CLRN1-203ENST00000328863 RNF6Q9Y252 685 aa13.42□□□□□ -0.26
CLRN1-203ENST00000328863 L3MBTL1Q9Y468 752 aa13.42□□□□□ -0.26
CLRN1-203ENST00000328863 PCNX3Q9H6A9 2034 aa13.42□□□□□ -0.26
CLRN1-203ENST00000328863 DOCK7Q96N67 2140 aa13.42□□□□□ -0.26
CLRN1-203ENST00000328863 CD8B2A6NJW9 211 aa13.41□□□□□ -0.26
CLRN1-203ENST00000328863 FAM90A27PA6NNH2 459 aa13.41□□□□□ -0.26
CLRN1-203ENST00000328863 DYNC1I1O14576 645 aa13.41□□□□□ -0.26
CLRN1-203ENST00000328863 SEC14L5O43304 696 aa13.41□□□□□ -0.26
CLRN1-203ENST00000328863 FCMRO60667 390 aa13.41□□□□□ -0.26
CLRN1-203ENST00000328863 EPPINO95925 133 aa13.41□□□□□ -0.26
CLRN1-203ENST00000328863 BCHEP06276 602 aa13.41□□□□□ -0.26
CLRN1-203ENST00000328863 ME2P23368 584 aa13.41□□□□□ -0.26
CLRN1-203ENST00000328863 RNF144AP50876 292 aaPredicted RBP13.41□□□□□ -0.26
CLRN1-203ENST00000328863 CLDN18P56856 261 aa13.41□□□□□ -0.26
CLRN1-203ENST00000328863 B3GALT5-AS1P59052 145 aa13.41□□□□□ -0.26
CLRN1-203ENST00000328863 RPS3AP61247 264 aaKnown RBP13.41□□□□□ -0.26
CLRN1-203ENST00000328863 SRYQ05066 204 aa13.41□□□□□ -0.26
CLRN1-203ENST00000328863 FGFBP1Q14512 234 aa13.41□□□□□ -0.26
CLRN1-203ENST00000328863 BCL2A1Q16548 175 aa13.41□□□□□ -0.26
CLRN1-203ENST00000328863 EIF3MQ7L2H7 374 aaKnown RBP13.41□□□□□ -0.26
CLRN1-203ENST00000328863 UBQLNLQ8IYU4 475 aa13.41□□□□□ -0.26
CLRN1-203ENST00000328863 GTPBP8Q8N3Z3 284 aaPredicted RBP13.41□□□□□ -0.26
CLRN1-203ENST00000328863 TSPEARQ8WU66 669 aa13.41□□□□□ -0.26
CLRN1-203ENST00000328863 SAP130Q9H0E3 1048 aa13.41□□□□□ -0.26
CLRN1-203ENST00000328863 NSRP1Q9H0G5 558 aaKnown RBP13.41□□□□□ -0.26
CLRN1-203ENST00000328863 CHST11Q9NPF2 352 aa13.41□□□□□ -0.26
CLRN1-203ENST00000328863 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.41□□□□□ -0.26
CLRN1-203ENST00000328863 CARD8Q9Y2G2 431 aa13.41□□□□□ -0.26
CLRN1-203ENST00000328863 NDUFAF1Q9Y375 327 aa13.41□□□□□ -0.26
CLRN1-203ENST00000328863 PCDHB14Q9Y5E9 798 aa13.41□□□□□ -0.26
CLRN1-203ENST00000328863 AP4B1Q9Y6B7 739 aa13.41□□□□□ -0.26
CLRN1-203ENST00000328863 UNC79Q9P2D8 2635 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 CENPVL1A0A0U1RR11 272 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 MBD3L4A6NDZ8 208 aaPredicted RBP13.4□□□□□ -0.26
CLRN1-203ENST00000328863 MBD3L3A6NE82 208 aaPredicted RBP13.4□□□□□ -0.26
CLRN1-203ENST00000328863 MBD3L5A6NJ08 208 aaPredicted RBP13.4□□□□□ -0.26
CLRN1-203ENST00000328863 CLCA1A8K7I4 914 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 HSPB2A8KAH6 182 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 CYSRT1A8MQ03 144 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 CLIC1O00299 241 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 CYP7B1O75881 506 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 IL2RAP01589 272 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 CHRM4P08173 479 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 UBTFL6P0CB48 400 aaPredicted RBP13.4□□□□□ -0.26
CLRN1-203ENST00000328863 ETFAP13804 333 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 HOXB9P17482 250 aaPredicted RBP13.4□□□□□ -0.26
CLRN1-203ENST00000328863 TIMP3P35625 211 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 ADH7P40394 386 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 MVDP53602 400 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 CHRNEQ04844 493 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 FOXF1Q12946 379 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 SKP2Q13309 424 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 MAPRE2Q15555 327 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 HSPB2Q16082 182 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 SYPL1Q16563 259 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 TMEM44Q2T9K0 475 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 CGB2Q6NT52 195 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 CBLN3Q6UW01 205 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 OLIG3Q7RTU3 272 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 DHDDSQ86SQ9 333 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 GRAMD2AQ8IUY3 354 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 CMIPQ8IY22 773 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 PEX5LQ8IYB4 626 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 ANKFN1Q8N957 763 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 OR5M1Q8NGP8 315 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 OR5W2Q8NH69 310 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 MBD3L2Q8NHZ7 208 aaPredicted RBP13.4□□□□□ -0.26
CLRN1-203ENST00000328863 WDR60Q8WVS4 1066 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 PMM1Q92871 262 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 RNF145Q96MT1 663 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 ZFP3Q96NJ6 502 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 TUBA1CQ9BQE3 449 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 SLC38A1Q9H2H9 487 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 CALHM2Q9HA72 323 aa13.4□□□□□ -0.26
CLRN1-203ENST00000328863 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms