RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 C18orf12Q96KH6 178 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 KLHL15Q96M94 604 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 BTBD2Q9BX70 525 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 PRRG4Q9BZD6 226 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 UBQLN4Q9NRR5 601 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 GPATCH2Q9NW75 528 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 ELOVL5Q9NYP7 299 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 EMC9Q9Y3B6 208 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 NIPBLQ6KC79 2804 aaeCLIP11.04□□□□□ -0.646e-7■■■□□ 15
TPM3-204ENST00000323144 SMPD2O60906 423 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 SLU7O95391 586 aaKnown RBP11.03□□□□□ -0.64
TPM3-204ENST00000323144 NTN1O95631 604 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 PLAUP00749 431 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 HPGDP15428 266 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 MAPK1P28482 360 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 CTBP2P56545 445 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 MLC1Q15049 377 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 TSC22D1Q15714 1073 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 ACKR1Q16570 336 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 SPDYE7PQ495Y7 208 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 ATP6AP1LQ52LC2 224 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 R3HCC1LQ7Z5L2 792 aaKnown RBP11.03□□□□□ -0.64
TPM3-204ENST00000323144 CLECL1Q8IZS7 167 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 TMCO5AQ8N6Q1 288 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 FNDC5Q8NAU1 212 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 PHOSPHO1Q8TCT1 267 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 AENQ8WTP8 325 aaKnown RBP11.03□□□□□ -0.64
TPM3-204ENST00000323144 ROBO4Q8WZ75 1007 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 CAVIN3Q969G5 261 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 COX4I2Q96KJ9 171 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 PPP1R36Q96LQ0 422 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 PPP3R2Q96LZ3 170 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 Q96MF0 132 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 STACQ99469 402 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 SLC39A3Q9BRY0 314 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 PIGUQ9H490 435 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 DUSP22Q9NRW4 184 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 ZDHHC2Q9UIJ5 367 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 MCTS1Q9ULC4 181 aaKnown RBP11.03□□□□□ -0.64
TPM3-204ENST00000323144 CARD8Q9Y2G2 431 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 PRR14LQ5THK1 2151 aa11.03□□□□□ -0.64
TPM3-204ENST00000323144 FN1P02751 2386 aaKnown RBP11.02□□□□□ -0.65
TPM3-204ENST00000323144 FREM1Q5H8C1 2179 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 IGHV3-15A0A0B4J1V0 119 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 TRIM64A6NGJ6 449 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 TRIM64BA6NI03 449 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 TMEM114B3SHH9 223 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 NPIPB9F8W1W9 429 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 H7C1Q1 480 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 ADAMDEC1O15204 470 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 EFNA2O43921 213 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 SYNGR4O95473 234 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 NUDT14O95848 222 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 FGF4P08620 206 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 INHBBP09529 407 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 FOSL1P15407 271 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 ATP6V1C1P21283 382 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 ME2P23368 584 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 ELK4P28324 431 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 ADSLP30566 484 aaPredicted RBP11.02□□□□□ -0.65
TPM3-204ENST00000323144 SERPINB4P48594 390 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 RAC1P63000 192 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 OCRLQ01968 901 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 LTBQ06643 244 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 PDCD2Q16342 344 aaPredicted RBP11.02□□□□□ -0.65
TPM3-204ENST00000323144 C6orf136Q5SQH8 315 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 IL23RQ5VWK5 629 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 ZCCHC12Q6PEW1 402 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 LRIG3Q6UXM1 1119 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 ESPNLQ6ZVH7 1005 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 ATG4DQ86TL0 474 aaPredicted RBP11.02□□□□□ -0.65
TPM3-204ENST00000323144 BIVMQ86UB2 503 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 WFDC8Q8IUA0 241 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 MISPQ8IVT2 679 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 RIMKLAQ8IXN7 391 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 OR56A1Q8NGH5 318 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 PSMA8Q8TAA3 256 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 SFXN5Q8TD22 340 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 ACTRT2Q8TDY3 377 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 OR5P2Q8WZ92 322 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 TRIM44Q96DX7 344 aaPredicted RBP11.02□□□□□ -0.65
TPM3-204ENST00000323144 OR7D2Q96RA2 312 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 ACTRT3Q9BYD9 372 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 ACTR6Q9GZN1 396 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 ZNF395Q9H8N7 513 aaPredicted RBP11.02□□□□□ -0.65
TPM3-204ENST00000323144 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.02□□□□□ -0.65
TPM3-204ENST00000323144 ICAM5Q9UMF0 924 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 V9GYY5 206 aaPredicted RBP11.02□□□□□ -0.65
TPM3-204ENST00000323144 CR1P17927 2039 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 NUP214P35658 2090 aaPredicted RBP11.02□□□□□ -0.65
TPM3-204ENST00000323144 ZANQ9Y493 2812 aa11.02□□□□□ -0.65
TPM3-204ENST00000323144 KLF4O43474 513 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 ITM2AO43736 263 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 TYROBPO43914 113 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 H6PDO95479 791 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 TUBBP07437 444 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 BPGMP07738 259 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 G6PDP11413 515 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 PRKCAP17252 672 aa11.01□□□□□ -0.65
TPM3-204ENST00000323144 EDNRAP25101 427 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms