RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 TAS2R20P59543 309 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 LBHQ53QV2 105 aaPredicted RBP6.66□□□□□ -1.34
SMC1A-201ENST00000322213 CHST9Q7L1S5 443 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 BTLAQ7Z6A9 289 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 FAM129CQ86XR2 697 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 OR52N2Q8NGI0 321 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 OR5H2Q8NGV7 314 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF384Q8TF68 577 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 SLC38A3Q99624 504 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 ISYNA1Q9NPH2 558 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 COPS7AQ9UBW8 275 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 SORL1Q92673 2214 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 TMEM82A0PJX8 343 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 MYBPHLA2RUH7 354 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 WASH3PC4AMC7 463 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 AGPAT2O15120 278 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 SLC16A8O95907 504 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 ADH1CP00326 375 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 IFNA5P01569 189 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 IMPA1P29218 277 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF791Q3KP31 576 aaPredicted RBP6.66□□□□□ -1.34
SMC1A-201ENST00000322213 TANGO2Q6ICL3 276 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 TMEM150AQ86TG1 271 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 RBM18Q96H35 190 aaKnown RBP6.66□□□□□ -1.34
SMC1A-201ENST00000322213 PTCHD1Q96NR3 888 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 FZD8Q9H461 694 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 PLSCR3Q9NRY6 295 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 MAN2C1Q9NTJ4 1040 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 TRAPPC4Q9Y296 219 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 A0A1W2PS29 197 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 EEF1E1-BLOC1S5C9J1V9 151 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 MAFKO60675 156 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 CSNK2A2P19784 350 aaPredicted RBP6.66□□□□□ -1.34
SMC1A-201ENST00000322213 SLC14A2Q15849 920 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 FAM124AQ86V42 546 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 OR2AJ1Q8NGZ0 328 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF582Q96NG8 517 aaPredicted RBP6.66□□□□□ -1.34
SMC1A-201ENST00000322213 SLC5A7Q9GZV3 580 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 QTRT2Q9H974 415 aaKnown RBP6.66□□□□□ -1.34
SMC1A-201ENST00000322213 BTNL2Q9UIR0 455 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 TNS1Q9HBL0 1735 aaKnown RBP6.66□□□□□ -1.34
SMC1A-201ENST00000322213 AIPO00170 330 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 ONECUT3O60422 494 aaPredicted RBP6.66□□□□□ -1.34
SMC1A-201ENST00000322213 SOX9P48436 509 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 SGSHP51688 502 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 FOXA1P55317 472 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 LPPQ93052 612 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 TUBG2Q9NRH3 451 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 PLCXD1Q9NUJ7 323 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 KCNK2O95069 426 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 SYN1P17600 705 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 RAB6AP20340 208 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 MTNR1BP49286 362 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 SLC35G1Q2M3R5 365 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 FAM182BQ5T319 152 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 PLBD1Q6P4A8 553 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 TMEM88Q6PEY1 159 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 TMIGD1Q6UXZ0 262 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 OR8D1Q8WZ84 308 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 DDOQ99489 341 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 ACTRT3Q9BYD9 372 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 TMEM235A6NFC5 223 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 AKR7A2O43488 359 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 OR2F2O95006 317 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 GBAP04062 536 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 OR8U9P0C7N5 309 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 HRH2P25021 359 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 SLC6A9P48067 706 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 GZMKP49863 264 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 CCR6P51684 374 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 RPS25P62851 125 aaKnown RBP6.66□□□□□ -1.34
SMC1A-201ENST00000322213 MGAT3Q09327 533 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 OR2F1Q13607 317 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 NDUFAF7Q7L592 441 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 GPAT4Q86UL3 456 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 RAB3CQ96E17 227 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF559Q9BR84 538 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 RIPK3Q9Y572 518 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 MROH6A6NGR9 719 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 F10P00742 488 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 NT5EP21589 574 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 PPM1AP35813 382 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 CSKP41240 450 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 CAV3P56539 151 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 FUBP3Q96I24 572 aaKnown RBP eCLIP6.65□□□□□ -1.344e-9■□□□□ 10.3
SMC1A-201ENST00000322213 TTTY10Q9BZA0 68 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 ACPTQ9BZG2 426 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 ACAD8Q9UKU7 415 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 PLSCR1O15162 318 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 GJA5P36382 358 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 KIAA1024LP59773 190 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 RPS26P62854 115 aaKnown RBP6.65□□□□□ -1.34
SMC1A-201ENST00000322213 RNASE10Q5GAN6 216 aaKnown RBP6.65□□□□□ -1.34
SMC1A-201ENST00000322213 OR7D4Q8NG98 312 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 HUS1BQ8NHY5 278 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 GLYATL1Q969I3 302 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 INTS12Q96CB8 462 aaKnown RBP6.65□□□□□ -1.34
SMC1A-201ENST00000322213 RNF32Q9H0A6 362 aa6.65□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF768Q9H5H4 540 aaKnown RBP6.65□□□□□ -1.34
SMC1A-201ENST00000322213 PRAMEF11O60813 436 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms