RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 DNAJC15Q9Y5T4 150 aa12.71□□□□□ -0.37
RPP40-201ENST00000319533 PTGDR2Q9Y5Y4 395 aa12.71□□□□□ -0.37
RPP40-201ENST00000319533 PRR14LQ5THK1 2151 aa12.71□□□□□ -0.37
RPP40-201ENST00000319533 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 A0A1W2PRB8 838 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 CXCL13O43927 109 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 TBX19O60806 448 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 OXSR1O95747 527 aaPredicted RBP12.7□□□□□ -0.38
RPP40-201ENST00000319533 PLGP00747 810 aaPredicted RBP12.7□□□□□ -0.38
RPP40-201ENST00000319533 LINC00032P0C843 101 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 LCN1P31025 176 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 ETV4P43268 484 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 SERPINB4P48594 390 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 RPL38P63173 70 aaKnown RBP12.7□□□□□ -0.38
RPP40-201ENST00000319533 VPS26BQ4G0F5 336 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 EXOSC6Q5RKV6 272 aaKnown RBP12.7□□□□□ -0.38
RPP40-201ENST00000319533 AGBL2Q5U5Z8 902 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 ESPNLQ6ZVH7 1005 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 CXXC5Q7LFL8 322 aaKnown RBP12.7□□□□□ -0.38
RPP40-201ENST00000319533 ZNF551Q7Z340 670 aaPredicted RBP12.7□□□□□ -0.38
RPP40-201ENST00000319533 GALNT10Q86SR1 603 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 EXOC3L1Q86VI1 746 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 CDRT4Q8N9R6 151 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 OR2V1Q8NHB1 315 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 POC1BQ8TC44 478 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 AGR3Q8TD06 166 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 PIK3R3Q92569 461 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 GIMAP5Q96F15 307 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 PLPPR2Q96GM1 343 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 EGLN2Q96KS0 407 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 KCNK17Q96T54 332 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 KCNK9Q9NPC2 374 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 MED17Q9NVC6 651 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 TMED5Q9Y3A6 229 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 ACTL7BQ9Y614 415 aa12.7□□□□□ -0.38
RPP40-201ENST00000319533 SONP18583 2426 aaKnown RBP12.69□□□□□ -0.38
RPP40-201ENST00000319533 A0A0J9YW62 118 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 TMEM233B4DJY2 109 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 OVOL3O00110 214 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 PIP5K1BO14986 540 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 BIRC5O15392 142 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 NDUFB5O43674 189 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 CRLF1O75462 422 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 SYNGR4O95473 234 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 AGTR1P30556 359 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 FRKP42685 505 aaPredicted RBP12.69□□□□□ -0.38
RPP40-201ENST00000319533 RFX3P48380 749 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 ATP5J2P56134 94 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 TNK1Q13470 666 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 PLPPR5Q32ZL2 321 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 MFSD12Q6NUT3 480 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 Q6ZSR9 355 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 STK32CQ86UX6 486 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 WFDC8Q8IUA0 241 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 OR6Y1Q8NGX8 325 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 LILRB1Q8NHL6 650 aaPredicted RBP12.69□□□□□ -0.38
RPP40-201ENST00000319533 CEP70Q8NHQ1 597 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 GPR151Q8TDV0 419 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 PKNOX2Q96KN3 472 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 FCRL1Q96LA6 429 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 ATP6V1G3Q96LB4 118 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 PPP3R2Q96LZ3 170 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 RNF145Q96MT1 663 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 CCT7Q99832 543 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 HDHD5Q9BXW7 423 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 TUBB1Q9H4B7 451 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 RTTNQ86VV8 2226 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 STAB1Q9NY15 2570 aa12.69□□□□□ -0.38
RPP40-201ENST00000319533 A0A1W2PQD3 144 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 WDR91A4D1P6 747 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 LSM1O15116 133 aaKnown RBP12.68□□□□□ -0.38
RPP40-201ENST00000319533 PDPK1O15530 556 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 GMFGO60234 142 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 GCM2O75603 506 aaPredicted RBP12.68□□□□□ -0.38
RPP40-201ENST00000319533 KCNK2O95069 426 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 HSPA4LO95757 839 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 THBS1P07996 1170 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 ACP2P11117 423 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 DDX5P17844 614 aaKnown RBP12.68□□□□□ -0.38
RPP40-201ENST00000319533 MAPK1P28482 360 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 CHI3L2Q15782 390 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 ETFDHQ16134 617 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 GALNTL6Q49A17 601 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 ATP6AP1LQ52LC2 224 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 DMRTA1Q5VZB9 504 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 GTF2IRD2BQ6EKJ0 949 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 ZAR1Q86SH2 424 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 GTF2IRD2Q86UP8 949 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 MISPQ8IVT2 679 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 GABRG1Q8N1C3 465 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 STEAP2Q8NFT2 490 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 OR2T11Q8NH01 316 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 SLC9A6Q92581 669 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 AKAP1Q92667 903 aaKnown RBP eCLIP12.68□□□□□ -0.38
RPP40-201ENST00000319533 KLHDC3Q9BQ90 382 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 MED4Q9NPJ6 270 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 EQTNQ9NQ60 294 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 UBQLN4Q9NRR5 601 aa12.68□□□□□ -0.38
RPP40-201ENST00000319533 TMEM114B3SHH9 223 aa12.67□□□□□ -0.38
RPP40-201ENST00000319533 TNFSF11O14788 317 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms