RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 TIMP4Q99727 224 aa6.61□□□□□ -1.35
NPHP1-201ENST00000316534 NUDT22Q9BRQ3 303 aa6.61□□□□□ -1.35
NPHP1-201ENST00000316534 ITPAQ9BY32 194 aa6.61□□□□□ -1.35
NPHP1-201ENST00000316534 TRIM2Q9C040 744 aa6.61□□□□□ -1.35
NPHP1-201ENST00000316534 AKIP1Q9NQ31 210 aa6.61□□□□□ -1.35
NPHP1-201ENST00000316534 IL20RAQ9UHF4 553 aa6.61□□□□□ -1.35
NPHP1-201ENST00000316534 DOLKQ9UPQ8 538 aa6.61□□□□□ -1.35
NPHP1-201ENST00000316534 A0A087WUJ7 227 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 TMEM129A0AVI4 362 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 IRGMA1A4Y4 181 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 SERINC4A6NH21 518 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 SLC22A1O15245 554 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 FADS1O60427 444 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 SDC3O75056 442 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 CD97P48960 835 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 NUBP1P53384 320 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 TAS2R41P59536 307 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 ID2Q02363 134 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 KCNAB1Q14722 419 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 FLYWCH1Q4VC44 716 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 CCNJQ5T5M9 372 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 GUSBP11Q6P575 273 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 LYPD8Q6UX82 237 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 OR4N2Q8NGD1 307 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 PIGXQ8TBF5 258 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 SLC2A12Q8TD20 617 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 CHPT1Q8WUD6 406 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 TMEM255BQ8WV15 326 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 KISS1RQ969F8 398 aaPredicted RBP6.6□□□□□ -1.35
NPHP1-201ENST00000316534 MMABQ96EY8 250 aaPredicted RBP6.6□□□□□ -1.35
NPHP1-201ENST00000316534 SPRY4Q9C004 299 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 MIR1-1HGQ9H1L0 117 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 ARMC7Q9H6L4 198 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 VCX3AQ9NNX9 186 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 EQTNQ9NQ60 294 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 FBXO8Q9NRD0 319 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 SLC7A7Q9UM01 511 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 BAIAP2Q9UQB8 552 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 SIGLEC7Q9Y286 467 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 IGKV1D-42A0A075B6H8 117 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 STK25O00506 426 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 AP3D1O14617 1153 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 ENTPD6O75354 484 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 NADKO95544 446 aaPredicted RBP6.6□□□□□ -1.35
NPHP1-201ENST00000316534 STSP08842 583 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 CCNYL3P0C7X3 344 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 MAKP20794 623 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 GALP22466 123 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 MST1P26927 711 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 CSTF2P33240 577 aaKnown RBP eCLIP6.6□□□□□ -1.35
NPHP1-201ENST00000316534 MLLT10P55197 1068 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 CCL7P80098 99 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 RAB40BQ12829 278 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 TARDBPQ13148 414 aaKnown RBP eCLIP6.6□□□□□ -1.35
NPHP1-201ENST00000316534 IL11RAQ14626 422 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 ANKDD1AQ495B1 522 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 CD200R1LQ6Q8B3 271 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 TSSK4Q6SA08 328 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 NUBPLQ8TB37 319 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 SLC9A6Q92581 669 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 LCORQ96JN0 433 aaPredicted RBP6.6□□□□□ -1.35
NPHP1-201ENST00000316534 FRMD6Q96NE9 622 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 COPS4Q9BT78 406 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 VN1R1Q9GZP7 353 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 LAT2Q9GZY6 243 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 Q9N2J8 555 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 FANCFQ9NPI8 374 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 AASSQ9UDR5 926 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 RPL36Q9Y3U8 105 aaKnown RBP6.6□□□□□ -1.35
NPHP1-201ENST00000316534 PCDHGA5Q9Y5G8 931 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 CCDC182A6NF36 153 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 PRODHO43272 600 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 OR10H3O60404 316 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 FAM20BO75063 409 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 RFPL3O75679 317 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 CER1O95813 267 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 TXNDC12O95881 172 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 SCG5P05408 212 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 HBQ1P09105 142 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 FBLP22087 321 aaKnown RBP6.6□□□□□ -1.35
NPHP1-201ENST00000316534 ETV6P41212 452 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 SLC9A3P48764 834 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 RGS8P57771 180 aaPredicted RBP6.6□□□□□ -1.35
NPHP1-201ENST00000316534 PIGFQ07326 219 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 ZNF155Q12901 538 aaPredicted RBP6.6□□□□□ -1.35
NPHP1-201ENST00000316534 PGGHGQ32M88 737 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 AMZ1Q400G9 498 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 GPR107Q5VW38 600 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 NXNL2Q5VZ03 156 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 ATG4DQ86TL0 474 aaPredicted RBP6.6□□□□□ -1.35
NPHP1-201ENST00000316534 CLVS1Q8IUQ0 354 aaPredicted RBP6.6□□□□□ -1.35
NPHP1-201ENST00000316534 NLGN4XQ8N0W4 816 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 ZNF540Q8NDQ6 660 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 PROKR2Q8NFJ6 384 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 TMEM239Q8WW34 195 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 HGDQ93099 445 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 SENP5Q96HI0 755 aaPredicted RBP6.6□□□□□ -1.35
NPHP1-201ENST00000316534 ADNPQ9H2P0 1102 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 CLN6Q9NWW5 311 aa6.6□□□□□ -1.35
NPHP1-201ENST00000316534 KIAA1549Q9HCM3 1950 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms