RNA–Protein interactions for RNA: ENST00000316485.11

PATJ-202, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 5 BASIC

Gene PATJ, Length 3,657 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-202ENST00000316485 EGLN3Q9H6Z9 239 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 VCX3AQ9NNX9 186 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 POLE3Q9NRF9 147 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 C19orf25Q9UFG5 118 aaPredicted RBP4.11□□□□□ -1.75
PATJ-202ENST00000316485 RNF6Q9Y252 685 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 PCDHGB2Q9Y5G2 931 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 PCDHGA6Q9Y5G7 932 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 A0A1B0GWA3 101 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 ANKRD33BA6NCL7 494 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 FRG2CA6NGY1 282 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 MASP2O00187 686 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 TNFRSF10AO00220 468 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 HCRTR2O43614 444 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 ICOSLGO75144 302 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 OR5F1O95221 314 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 IGKV3-11P04433 115 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 TFAP2AP05549 437 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 GP1BAP07359 652 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 TCN2P20062 427 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 GGT2P36268 569 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 NRG3P56975 720 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 RNF4P78317 190 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 INSM1Q01101 510 aaPredicted RBP4.11□□□□□ -1.75
PATJ-202ENST00000316485 GINS1Q14691 196 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 MAD2L1BPQ15013 274 aaPredicted RBP4.11□□□□□ -1.75
PATJ-202ENST00000316485 CD226Q15762 336 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 C11orf91Q3C1V1 193 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 RBM48Q5RL73 367 aaKnown RBP4.11□□□□□ -1.75
PATJ-202ENST00000316485 KCTD8Q6ZWB6 473 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 ZNF550Q7Z398 422 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 MARCH3Q86UD3 253 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 DEPDC4Q8N2C3 294 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 TCEANCQ8N8B7 351 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 BMPERQ8N8U9 685 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 DEFB124Q8NES8 71 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 GNPDA2Q8TDQ7 276 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 ACOT11Q8WXI4 607 aaPredicted RBP4.11□□□□□ -1.75
PATJ-202ENST00000316485 HDAC2Q92769 488 aaKnown RBP4.11□□□□□ -1.75
PATJ-202ENST00000316485 TMIGD2Q96BF3 282 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 SPSB2Q99619 263 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 GPA33Q99795 319 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 RHNO1Q9BSD3 238 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 DGCR6LQ9BY27 220 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 DEFB126Q9BYW3 111 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 KRCC1Q9NPI7 259 aaPredicted RBP4.11□□□□□ -1.75
PATJ-202ENST00000316485 ATP13A2Q9NQ11 1180 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 UBQLN4Q9NRR5 601 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 TBC1D23Q9NUY8 699 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 TESQ9UGI8 421 aaKnown RBP4.11□□□□□ -1.75
PATJ-202ENST00000316485 ENOPH1Q9UHY7 261 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 ACAD8Q9UKU7 415 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 NDRG4Q9ULP0 352 aaKnown RBP4.11□□□□□ -1.75
PATJ-202ENST00000316485 TPRKBQ9Y3C4 175 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 WDR87Q6ZQQ6 2873 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 SPTA1P02549 2419 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 APC2O95996 2303 aa4.11□□□□□ -1.75
PATJ-202ENST00000316485 A6NHS1 94 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 SAGE2PA6NJ88 616 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 TTC36A6NLP5 189 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 OIP5O43482 229 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 NDUFB5O43674 189 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 MT-CO3P00414 261 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 THY1P04216 161 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 UBL4AP11441 157 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 RPS4Y1P22090 263 aaKnown RBP4.1□□□□□ -1.75
PATJ-202ENST00000316485 GALNSP34059 522 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 NR1H2P55055 460 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 NUP107P57740 925 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 TOP3AQ13472 1001 aaPredicted RBP4.1□□□□□ -1.75
PATJ-202ENST00000316485 IL18R1Q13478 541 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 FGFBP1Q14512 234 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 CLPPQ16740 277 aaPredicted RBP4.1□□□□□ -1.75
PATJ-202ENST00000316485 ISXQ2M1V0 245 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 KCTD21Q4G0X4 260 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 EXOSC6Q5RKV6 272 aaKnown RBP4.1□□□□□ -1.75
PATJ-202ENST00000316485 HES3Q5TGS1 186 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 BROXQ5VW32 411 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 FCRLBQ6BAA4 426 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 ZNF770Q6IQ21 691 aaPredicted RBP4.1□□□□□ -1.75
PATJ-202ENST00000316485 CBLN3Q6UW01 205 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 BCDIN3DQ7Z5W3 292 aaKnown RBP4.1□□□□□ -1.75
PATJ-202ENST00000316485 BPHLQ86WA6 291 aaPredicted RBP4.1□□□□□ -1.75
PATJ-202ENST00000316485 MARCH9Q86YJ5 346 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 CCDC71Q8IV32 467 aaPredicted RBP4.1□□□□□ -1.75
PATJ-202ENST00000316485 ENTHD1Q8IYW4 607 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 PARP8Q8N3A8 854 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 MORN4Q8NDC4 146 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 TMEM239Q8WW34 195 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 ADIPOR1Q96A54 375 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 PLEKHA8Q96JA3 519 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 HRASLS5Q96KN8 279 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 CDC6Q99741 560 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 ZNF559Q9BR84 538 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 TSSK6Q9BXA6 273 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 GABARAPL3Q9BY60 117 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 TGIF2Q9GZN2 237 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 DNAJB12Q9NXW2 375 aaKnown RBP4.1□□□□□ -1.75
PATJ-202ENST00000316485 DNAJC27Q9NZQ0 273 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 ERVK-18Q9QC07 812 aa4.1□□□□□ -1.75
PATJ-202ENST00000316485 WARS2Q9UGM6 360 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms