RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 ZNF384Q8TF68 577 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 CMSS1Q9BQ75 279 aaKnown RBP3□□□□□ -1.93
CLOCK-201ENST00000309964 YIPF4Q9BSR8 244 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 PBDC1Q9BVG4 233 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 TOR3AQ9H497 397 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 C11orf16Q9NQ32 467 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 FGF21Q9NSA1 209 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 MMP17Q9ULZ9 603 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 OAZ3Q9UMX2 235 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 SH2B3Q9UQQ2 575 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 YARS2Q9Y2Z4 477 aaKnown RBP3□□□□□ -1.93
CLOCK-201ENST00000309964 ANKRD34BA5PLL1 514 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 C2orf78A6NCI8 922 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 A8MVM7 634 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 MPPED1O15442 326 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 SIGLEC6O43699 453 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 EIF4E2O60573 245 aaKnown RBP3□□□□□ -1.93
CLOCK-201ENST00000309964 TPST2O60704 377 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 CTNSO60931 367 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 PRKD3O94806 890 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 CXCL10P02778 98 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 ZNF133P52736 654 aaPredicted RBP3□□□□□ -1.93
CLOCK-201ENST00000309964 ATP1B3P54709 279 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 TAS2R20P59543 309 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 ACSBG2Q5FVE4 666 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 METRNLQ641Q3 311 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 B3GNT9Q6UX72 402 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 AMIGO2Q86SJ2 522 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 SGPP2Q8IWX5 399 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 OR14K1Q8NGZ2 314 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 OR1E3Q8WZA6 343 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 MUL1Q969V5 352 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 SH3YL1Q96HL8 342 aaPredicted RBP3□□□□□ -1.93
CLOCK-201ENST00000309964 WDR83Q9BRX9 315 aaKnown RBP3□□□□□ -1.93
CLOCK-201ENST00000309964 SMG9Q9H0W8 520 aaKnown RBP3□□□□□ -1.93
CLOCK-201ENST00000309964 PLEKHA3Q9HB20 300 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 SIX2Q9NPC8 291 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 DECR2Q9NUI1 292 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 PCDHGA6Q9Y5G7 932 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 RALGAPA2Q2PPJ7 1873 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 TET1Q8NFU7 2136 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 PDCD11Q14690 1871 aaKnown RBP3□□□□□ -1.93
CLOCK-201ENST00000309964 A8MUA0 341 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 LMO7DNF2Z398 122 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 F6UZH7 168 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 NUDT21O43809 227 aaKnown RBP3□□□□□ -1.93
CLOCK-201ENST00000309964 MED6O75586 246 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 ITGBL1O95965 494 aaPredicted RBP3□□□□□ -1.93
CLOCK-201ENST00000309964 SPARCP09486 303 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 UBBP0CG47 229 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 UBCP0CG48 685 aaKnown RBP3□□□□□ -1.93
CLOCK-201ENST00000309964 AK4P27144 223 aaPredicted RBP3□□□□□ -1.93
CLOCK-201ENST00000309964 ARL3P36405 182 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 APOBEC1P41238 236 aaKnown RBP3□□□□□ -1.93
CLOCK-201ENST00000309964 GSK3BP49841 420 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 RAB11AP62491 216 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 AQP6Q13520 282 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 IHHQ14623 411 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 SPHARQ15513 63 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 BCL7AQ4VC05 210 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 WDR5BQ86VZ2 330 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 SIMC1Q8NDZ2 872 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 ASB11Q8WXH4 323 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 LOXL4Q96JB6 756 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 ZFP3Q96NJ6 502 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 ELF4Q99607 663 aaPredicted RBP3□□□□□ -1.93
CLOCK-201ENST00000309964 TPSD1Q9BZJ3 242 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 APMAPQ9HDC9 416 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 UCKL1Q9NWZ5 548 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 SLC17A6Q9P2U8 582 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 CLEC4EQ9ULY5 219 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 R3HDM2Q9Y2K5 976 aaKnown RBP3□□□□□ -1.93
CLOCK-201ENST00000309964 RNF11Q9Y3C5 154 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 PRAF2O60831 178 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 MTX2O75431 263 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 C6orf47O95873 294 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 LCATP04180 440 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 CTXN2P0C2S0 81 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 S100A2P29034 98 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 TBC1D28Q2M2D7 210 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 LRRC73Q5JTD7 316 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 FAM209AQ5JX71 171 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3□□□□□ -1.93
CLOCK-201ENST00000309964 RNF175Q8N4F7 328 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 ENDOVQ8N8Q3 282 aaKnown RBP3□□□□□ -1.93
CLOCK-201ENST00000309964 OR4N2Q8NGD1 307 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 LMO3Q8TAP4 145 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 NDNFQ8TB73 568 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 C16orf78Q8WTQ4 265 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 UBXN10Q96LJ8 280 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 PRRC1Q96M27 445 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 SORCS2Q96PQ0 1159 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 OR6C1Q96RD1 312 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 ULBP2Q9BZM5 246 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 SLC6A20Q9NP91 592 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 HEBP1Q9NRV9 189 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 RASD1Q9Y272 281 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 CCDC187A0A096LP49 1063 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 PRAMEF33A0A0G2JMD5 474 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 SYT5O00445 386 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms