RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 BCKDHAP12694 445 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 RPA2P15927 270 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 GPR3P46089 330 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 ERVK-16P61578 105 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 PUM1Q14671 1186 aaKnown RBP eCLIP3.79□□□□□ -1.8
USH2A-201ENST00000307340 DUSP7Q16829 419 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 MTURNQ8N3F0 131 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 ARRDC1Q8N5I2 433 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 TMEM163Q8TC26 289 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 M1APQ8TC57 530 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 NDUFB11Q9NX14 153 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 CHRNA9Q9UGM1 479 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 ACSL6Q9UKU0 697 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 HS3ST4Q9Y661 456 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 TRAV1-2A0A0B4J238 106 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 A6NHS1 94 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 SERPINE3A8MV23 424 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 ADH4P08319 380 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 DBTP11182 482 aaKnown RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 CYBAP13498 195 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 HTR1FP30939 366 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 HOXD12P35452 270 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 RAB11AP62491 216 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 ZNF155Q12901 538 aaPredicted RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 TSPAN31Q12999 210 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 LGALSLQ3ZCW2 172 aaPredicted RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 TMEM220Q6QAJ8 160 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 ARMC10Q8N2F6 343 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 FUBP1Q96AE4 644 aaKnown RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 BIRC7Q96CA5 298 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 OR2A14Q96R47 310 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 ACSS2Q9NR19 701 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 A4GNTQ9UNA3 340 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 INMT-MINDY4F8WBC2 141 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 PPP1R2P9O14990 202 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 SYNGR4O95473 234 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 SLC35E2BP0CK96 405 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 IL3RAP26951 378 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 CD79BP40259 229 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 CAV3P56539 151 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 ASAH1Q13510 395 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 RNF19BQ6ZMZ0 732 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 OR4M1Q8NGD0 313 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 ZNF300Q96RE9 604 aaPredicted RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 IL25Q9H293 177 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 ELOVL3Q9HB03 270 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 GTF2A1LQ9UNN4 478 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 INPPL1O15357 1258 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 GLSO94925 669 aaPredicted RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 CSTAP01040 98 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 NAGAP17050 411 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 AFF3P51826 1226 aaKnown RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 HBA1P69905 142 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 BCL2L15Q5TBC7 163 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 TRAT1Q6PIZ9 186 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 SLC15A4Q8N697 577 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 FBXL12Q9NXK8 326 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 KMT2EQ8IZD2 1858 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 TBX19O60806 448 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 DNASE1P24855 282 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 SMAGPQ0VAQ4 97 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 RGNQ15493 299 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 SURF2Q15527 256 aaPredicted RBP3.78□□□□□ -1.8
USH2A-201ENST00000307340 UBE2UQ5VVX9 321 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 POC1BQ8TC44 478 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 TEPSINQ96N21 525 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 SYT11Q9BT88 431 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 CD300AQ9UGN4 299 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 CAMK2AQ9UQM7 478 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 HS3ST3A1Q9Y663 406 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 XKRY2A2RUG3 117 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 YJEFN3A6XGL0 299 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 GALR3O60755 368 aaPredicted RBP3.78□□□□□ -1.8
USH2A-201ENST00000307340 ASGR2P07307 311 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 H2AFB2P0C5Z0 115 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 BCL7AQ4VC05 210 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 RNASE10Q5GAN6 216 aaKnown RBP3.78□□□□□ -1.8
USH2A-201ENST00000307340 RNF220Q5VTB9 566 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 FAM160A2Q8N612 972 aaPredicted RBP3.78□□□□□ -1.8
USH2A-201ENST00000307340 DTWD2Q8NBA8 298 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 MARVELD3Q96A59 401 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 MAP1BP46821 2468 aaKnown RBP3.78□□□□□ -1.8
USH2A-201ENST00000307340 NRXN2Q9P2S2 1712 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 IGHG1P01857 330 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 ZDHHC11BP0C7U3 371 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 METTL15P1P0C7V9 234 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 ATXN1P54253 815 aaKnown RBP3.78□□□□□ -1.8
USH2A-201ENST00000307340 MAP1SQ66K74 1059 aaPredicted RBP3.78□□□□□ -1.8
USH2A-201ENST00000307340 TSSK4Q6SA08 328 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 DPPA3Q6W0C5 159 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 NLGN2Q8NFZ4 835 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 COPS9Q8WXC6 57 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 PP6455Q8WZ26 134 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 GMPPAQ96IJ6 420 aaPredicted RBP3.78□□□□□ -1.8
USH2A-201ENST00000307340 C10orf90Q96M02 699 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 TEX10Q9NXF1 929 aaPredicted RBP3.78□□□□□ -1.8
USH2A-201ENST00000307340 FBXL2Q9UKC9 423 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 DNAJC15Q9Y5T4 150 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 B4DXG7 233 aa3.78□□□□□ -1.8
USH2A-201ENST00000307340 NPIPA2E9PIF3 369 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms