RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 AMY2AP04746 511 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 SULT1A3P0DMM9 295 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 SULT1A4P0DMN0 295 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 USF1P22415 310 aaPredicted RBP4.59□□□□□ -1.67
CSMD3-201ENST00000297405 FXYD6P3P58550 94 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 CDK5R2Q13319 367 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 POU4F3Q15319 338 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 GPR157Q5UAW9 335 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF691Q5VV52 312 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 HGSNATQ68CP4 663 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 FA2HQ7L5A8 372 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 CPNE8Q86YQ8 564 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 PRR22Q8IZ63 422 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 SLC7A5P1Q8MH63 180 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 TBC1D20Q96BZ9 403 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 P2RY11Q96G91 374 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 FOXN4Q96NZ1 517 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 SORCS2Q96PQ0 1159 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 UBL7Q96S82 380 aaPredicted RBP4.59□□□□□ -1.67
CSMD3-201ENST00000297405 PORCNQ9H237 461 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 ACTL8Q9H568 366 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 MMP26Q9NRE1 261 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 CNOT4O95628 575 aaKnown RBP4.59□□□□□ -1.67
CSMD3-201ENST00000297405 ACTR1BP42025 376 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 RIDAP52758 137 aaKnown RBP4.59□□□□□ -1.67
CSMD3-201ENST00000297405 HLFQ16534 295 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 SLC27A1Q6PCB7 646 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 LCLAT1Q6UWP7 414 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 TMPRSS12Q86WS5 348 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 OR14L1PQ8NHC6 308 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 SLC25A46Q96AG3 418 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 LRRC3BQ96PB8 259 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 MFSD1Q9H3U5 465 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 GRHPRQ9UBQ7 328 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF629Q9UEG4 869 aaPredicted RBP4.59□□□□□ -1.67
CSMD3-201ENST00000297405 TANC1Q9C0D5 1861 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 CNTNAP2Q9UHC6 1331 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 A0A1W2PPV4 95 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 BLACEA4D250 179 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 CPSF4LA6NMK7 179 aaKnown RBP4.59□□□□□ -1.67
CSMD3-201ENST00000297405 SCG5P05408 212 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 HPNP05981 417 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 SERPINE2P07093 398 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 MMP2P08253 660 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 CSNK2A2P19784 350 aaPredicted RBP4.59□□□□□ -1.67
CSMD3-201ENST00000297405 TCL1AP56279 114 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 HABP2Q14520 560 aaPredicted RBP4.59□□□□□ -1.67
CSMD3-201ENST00000297405 LRRC26Q2I0M4 334 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 ENPP6Q6UWR7 440 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 MON1AQ86VX9 555 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF461Q8TAF7 563 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 TMEM163Q8TC26 289 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 GPR148Q8TDV2 347 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 SLC5A11Q8WWX8 675 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 SLC2A13Q96QE2 648 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 TM6SF2Q9BZW4 377 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 KCNK15Q9H427 330 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF331Q9NQX6 463 aaPredicted RBP4.59□□□□□ -1.67
CSMD3-201ENST00000297405 SMOXQ9NWM0 555 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 SARDHQ9UL12 918 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 TEX50A0A1B0GTY4 177 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 OR51F1A6NGY5 319 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 SOCS5O75159 536 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 TXNP10599 105 aaKnown RBP4.59□□□□□ -1.67
CSMD3-201ENST00000297405 MAN2A2P49641 1150 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 NHLH2Q02577 135 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF239Q16600 458 aaKnown RBP4.59□□□□□ -1.67
CSMD3-201ENST00000297405 OTOP3Q7RTS5 596 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 TMEM150AQ86TG1 271 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 SLC35F2Q8IXU6 374 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 TMEM151AQ8N4L1 468 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 CISD2Q8N5K1 135 aaKnown RBP4.59□□□□□ -1.67
CSMD3-201ENST00000297405 ZBTB2Q8N680 514 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 TTC28Q96AY4 2481 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 C5orf34Q96MH7 638 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 EBF1Q9UH73 591 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 A0A1B0GUH1 482 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 SLC15A5A6NIM6 579 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 ALDOBP05062 364 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 ELFN1P0C7U0 828 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF43P17038 809 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 PCGF2P35227 344 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 PER3P56645 1201 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 NFIXQ14938 502 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 FKBP1CQ5VVH2 108 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 TMEM184AQ6ZMB5 413 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 ABHD12BQ7Z5M8 362 aaPredicted RBP4.59□□□□□ -1.67
CSMD3-201ENST00000297405 PLK3Q9H4B4 646 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 OR6C2Q9NZP2 312 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 CPNE7Q9UBL6 633 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 SLC6A14Q9UN76 642 aa4.59□□□□□ -1.67
CSMD3-201ENST00000297405 NUDT21O43809 227 aaKnown RBP4.59□□□□□ -1.68
CSMD3-201ENST00000297405 NDUFV2P19404 249 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 KCNJ3P48549 501 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 WDR4P57081 412 aaKnown RBP4.59□□□□□ -1.68
CSMD3-201ENST00000297405 ELOBQ15370 118 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 EXT1Q16394 746 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 FAM185AQ8N0U4 392 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 OR5AP2Q8NGF4 316 aa4.59□□□□□ -1.68
CSMD3-201ENST00000297405 ZNF596Q8TC21 504 aa4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms