RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 PSMB10P40306 273 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 GSG1LQ6UXU4 331 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 HCAR1Q9BXC0 346 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 EIF5A2Q9GZV4 153 aaKnown RBP16.23■□□□□ 0.19
SHANK1-201ENST00000293441 CASC3O15234 703 aaKnown RBP16.23■□□□□ 0.19
SHANK1-201ENST00000293441 AFF3P51826 1226 aaKnown RBP16.23■□□□□ 0.19
SHANK1-201ENST00000293441 YPEL5P62699 121 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 NTRK2Q16620 822 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 ENTPD8Q5MY95 495 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 NENFQ9UMX5 172 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 MAB21L2Q9Y586 359 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 SERPINA5P05154 406 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 CHRM4P08173 479 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 LANCL3Q6ZV70 420 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 DPY19L4Q7Z388 723 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 ASB11Q8WXH4 323 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 BPIFA2Q96DR5 249 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 ABCG5Q9H222 651 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 POT1Q9NUX5 634 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 EMC3Q9P0I2 261 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 KLHL13Q9P2N7 655 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 ATG12O94817 140 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 LRRC18Q8N456 261 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 MARVELD2Q8N4S9 558 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 GLYATL2Q8WU03 294 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 GPN2Q9H9Y4 310 aaPredicted RBP16.23■□□□□ 0.19
SHANK1-201ENST00000293441 MARCH5Q9NX47 278 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 YARS2Q9Y2Z4 477 aaKnown RBP16.23■□□□□ 0.19
SHANK1-201ENST00000293441 FOXD2O60548 495 aaPredicted RBP16.22■□□□□ 0.19
SHANK1-201ENST00000293441 KNG1P01042 644 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 RETP07949 1114 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 RGS6P49758 472 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 SLC14A2Q15849 920 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 PXKQ7Z7A4 578 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 GAREM1Q9H706 876 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 ACOT13Q9NPJ3 140 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 DDX60Q8IY21 1712 aaKnown RBP16.22■□□□□ 0.19
SHANK1-201ENST00000293441 A0A1B0GV50 99 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 GYPBP06028 91 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 TRA2BP62995 288 aaKnown RBP16.22■□□□□ 0.19
SHANK1-201ENST00000293441 PLCXD3Q63HM9 321 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 ZNF704Q6ZNC4 412 aaPredicted RBP16.22■□□□□ 0.19
SHANK1-201ENST00000293441 FUNDC2Q9BWH2 189 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 AK6Q9Y3D8 172 aaKnown RBP16.22■□□□□ 0.19
SHANK1-201ENST00000293441 BLACEA4D250 179 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 DNAJB5O75953 348 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 CD34P28906 385 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 NKPD1Q17RQ9 610 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 MFSD9Q8NBP5 474 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 INTS14Q96SY0 518 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 RANBP3Q9H6Z4 567 aaPredicted RBP16.22■□□□□ 0.19
SHANK1-201ENST00000293441 VAPAQ9P0L0 249 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 EBF1Q9UH73 591 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 RHBDD3Q9Y3P4 386 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 TVP23AA6NH52 213 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 IL32P24001 234 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 GABRR1P24046 479 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 TGFBR3Q03167 851 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 VHLLQ6RSH7 139 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 ARRDC2Q8TBH0 407 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 TOMM40LQ969M1 308 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 PRRC1Q96M27 445 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 LOC102725191A0A1B0GVB3 256 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 FOXE1O00358 373 aaPredicted RBP16.22■□□□□ 0.19
SHANK1-201ENST00000293441 GPX3P22352 226 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 HLCSP50747 726 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 PAQR9Q6ZVX9 377 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 KLHDC9Q8NEP7 349 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 RSC1A1Q92681 617 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 LMF2Q9BU23 707 aaKnown RBP16.22■□□□□ 0.19
SHANK1-201ENST00000293441 TWSG1Q9GZX9 223 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 SLC25A18Q9H1K4 315 aa16.22■□□□□ 0.19
SHANK1-201ENST00000293441 PPP6CO00743 305 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 CREBL2O60519 120 aaPredicted RBP16.21■□□□□ 0.19
SHANK1-201ENST00000293441 DBHP09172 617 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 NCS1P62166 190 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 ZNF300Q96RE9 604 aaPredicted RBP16.21■□□□□ 0.19
SHANK1-201ENST00000293441 UBQLN4Q9NRR5 601 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 B3GNT2Q9NY97 397 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 GABBR2O75899 941 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 MYF6P23409 242 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 OR1Q1Q15612 314 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 WBP2NLQ6ICG8 309 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 MTFR2Q6P444 385 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 RFLNAQ6ZTI6 216 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 TMEM150AQ86TG1 271 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 SLC6A18Q96N87 628 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 SYT3Q9BQG1 590 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 DYNLRB1Q9NP97 96 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 SLC6A14Q9UN76 642 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 LINC01553A4QN01 128 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 ATXN1LP0C7T5 689 aaKnown RBP16.21■□□□□ 0.19
SHANK1-201ENST00000293441 NPR2P20594 1047 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 CHMP24386 653 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 HYAL4Q2M3T9 481 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 FAM26DQ5JW98 314 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 GPR157Q5UAW9 335 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 PRSS48Q7RTY5 328 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 SLC22A12Q96S37 553 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 CTRCQ99895 268 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms