RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 NLGN4XQ8N0W4 816 aa15.58■□□□□ 0.08
CPSF4-201ENST00000292476 CDRT4Q8N9R6 151 aa15.58■□□□□ 0.08
CPSF4-201ENST00000292476 VANGL1Q8TAA9 524 aaPredicted RBP15.58■□□□□ 0.08
CPSF4-201ENST00000292476 RHBDD1Q8TEB9 315 aa15.58■□□□□ 0.08
CPSF4-201ENST00000292476 DGAT2Q96PD7 388 aa15.58■□□□□ 0.08
CPSF4-201ENST00000292476 OR7D2Q96RA2 312 aa15.58■□□□□ 0.08
CPSF4-201ENST00000292476 ANKRD19PQ9H560 264 aa15.58■□□□□ 0.08
CPSF4-201ENST00000292476 ARMC7Q9H6L4 198 aa15.58■□□□□ 0.08
CPSF4-201ENST00000292476 SPAARA0A1B0GVQ0 90 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 A0A1W2PS29 197 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 H3BN98 237 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 KIAA0513O60268 411 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 AK1P00568 194 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 IFNGR2P38484 337 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 ZNF91Q05481 1191 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 MLLT11Q13015 90 aaPredicted RBP15.57■□□□□ 0.08
CPSF4-201ENST00000292476 TARDBPQ13148 414 aaKnown RBP eCLIP15.57■□□□□ 0.08
CPSF4-201ENST00000292476 C1DQ13901 141 aaKnown RBP15.57■□□□□ 0.08
CPSF4-201ENST00000292476 SSX1Q16384 188 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 C1orf94Q6P1W5 598 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 PODNL1Q6PEZ8 512 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 C16orf62Q7Z3J2 963 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 GALNT12Q8IXK2 581 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 CADM3Q8N126 398 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 CTHRC1Q96CG8 243 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 IL4I1Q96RQ9 567 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 CCDC32Q9BV29 185 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 CACYBPQ9HB71 228 aaKnown RBP15.57■□□□□ 0.08
CPSF4-201ENST00000292476 RARRES3Q9UL19 164 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 PAIP2BQ9ULR5 123 aaKnown RBP15.57■□□□□ 0.08
CPSF4-201ENST00000292476 DIMT1Q9UNQ2 313 aaKnown RBP15.57■□□□□ 0.08
CPSF4-201ENST00000292476 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 NTN3O00634 580 aaPredicted RBP15.57■□□□□ 0.08
CPSF4-201ENST00000292476 DYRK3O43781 588 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 CEACAM1P13688 526 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 FBLP22087 321 aaKnown RBP15.57■□□□□ 0.08
CPSF4-201ENST00000292476 ACP1P24666 158 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 PCYT1AP49585 367 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 MAN2A2P49641 1150 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 COPZ1P61923 177 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 ID2Q02363 134 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 SPHARQ15513 63 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 SPANXN2Q5MJ10 180 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 FHL5Q5TD97 284 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 RHBDD2Q6NTF9 364 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 MRGPREQ86SM8 312 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 CCDC190Q86UF4 302 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 VWA5B2Q8N398 1253 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 NANOGP1Q8N7R0 232 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 MORN4Q8NDC4 146 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 OR5D16Q8NGK9 328 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 OR9Q1Q8NGQ5 310 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 PMM1Q92871 262 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 RIT1Q92963 219 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 GIMAP5Q96F15 307 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 CCDC74BQ96LY2 380 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 STACQ99469 402 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 YIPF2Q9BWQ6 316 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 TSSK6Q9BXA6 273 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 HHATLQ9HCP6 504 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 EQTNQ9NQ60 294 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 MAN2C1Q9NTJ4 1040 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 MRPS18AQ9NVS2 196 aaKnown RBP15.57■□□□□ 0.08
CPSF4-201ENST00000292476 NDUFB11Q9NX14 153 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 MAT2BQ9NZL9 334 aa15.57■□□□□ 0.08
CPSF4-201ENST00000292476 MED19A0JLT2 244 aaPredicted RBP15.56■□□□□ 0.08
CPSF4-201ENST00000292476 TTC36A6NLP5 189 aa15.56■□□□□ 0.08
CPSF4-201ENST00000292476 SOX14O95416 240 aa15.56■□□□□ 0.08
CPSF4-201ENST00000292476 CHRM4P08173 479 aa15.56■□□□□ 0.08
CPSF4-201ENST00000292476 ADRA2AP08913 450 aa15.56■□□□□ 0.08
CPSF4-201ENST00000292476 MAT1AQ00266 395 aaKnown RBP15.56■□□□□ 0.08
CPSF4-201ENST00000292476 CDK5Q00535 292 aa15.56■□□□□ 0.08
CPSF4-201ENST00000292476 DNASE1L3Q13609 305 aa15.56■□□□□ 0.08
CPSF4-201ENST00000292476 GPAT3Q53EU6 434 aa15.56■□□□□ 0.08
CPSF4-201ENST00000292476 RBM45Q8IUH3 476 aaKnown RBP15.56■□□□□ 0.08
CPSF4-201ENST00000292476 CYP4Z2PQ8N1L4 340 aa15.56■□□□□ 0.08
CPSF4-201ENST00000292476 PARP16Q8N5Y8 322 aa15.56■□□□□ 0.08
CPSF4-201ENST00000292476 OR4K5Q8NGD3 323 aa15.56■□□□□ 0.08
CPSF4-201ENST00000292476 PRRG3Q9BZD7 231 aa15.56■□□□□ 0.08
CPSF4-201ENST00000292476 PIGUQ9H490 435 aa15.56■□□□□ 0.08
CPSF4-201ENST00000292476 ISYNA1Q9NPH2 558 aa15.56■□□□□ 0.08
CPSF4-201ENST00000292476 MKKSQ9NPJ1 570 aaPredicted RBP15.56■□□□□ 0.08
CPSF4-201ENST00000292476 ABCB10Q9NRK6 738 aa15.56■□□□□ 0.08
CPSF4-201ENST00000292476 DUSP22Q9NRW4 184 aa15.56■□□□□ 0.08
CPSF4-201ENST00000292476 TAS2R16Q9NYV7 291 aa15.56■□□□□ 0.08
CPSF4-201ENST00000292476 DNAJC27Q9NZQ0 273 aa15.56■□□□□ 0.08
CPSF4-201ENST00000292476 ZNF229Q9UJW7 825 aa15.56■□□□□ 0.08
CPSF4-201ENST00000292476 STUB1Q9UNE7 303 aa15.56■□□□□ 0.08
CPSF4-201ENST00000292476 TRAPPC4Q9Y296 219 aa15.56■□□□□ 0.08
CPSF4-201ENST00000292476 SNTNA6NMZ2 147 aa15.55■□□□□ 0.08
CPSF4-201ENST00000292476 CSO75390 466 aaKnown RBP15.55■□□□□ 0.08
CPSF4-201ENST00000292476 MMP11P24347 488 aa15.55■□□□□ 0.08
CPSF4-201ENST00000292476 PSMA1P25786 263 aaKnown RBP15.55■□□□□ 0.08
CPSF4-201ENST00000292476 SMSP52788 366 aa15.55■□□□□ 0.08
CPSF4-201ENST00000292476 DEFA1P59665 94 aa15.55■□□□□ 0.08
CPSF4-201ENST00000292476 DEFA3P59666 94 aa15.55■□□□□ 0.08
CPSF4-201ENST00000292476 EFNB1P98172 346 aa15.55■□□□□ 0.08
CPSF4-201ENST00000292476 FUT5Q11128 374 aa15.55■□□□□ 0.08
CPSF4-201ENST00000292476 IL11RAQ14626 422 aa15.55■□□□□ 0.08
CPSF4-201ENST00000292476 ZNHIT3Q15649 155 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms