RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 FIGLAQ6QHK4 219 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 LRRC28Q86X40 367 aaPredicted RBP15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 TMEM239Q8WW34 195 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 SLC2A4RGQ9NR83 387 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 SLC7A11Q9UPY5 501 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 RFXAPO00287 272 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 PPP3CBP16298 524 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 TACR1P25103 407 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 KCNJ5P48544 419 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 CAPZA1P52907 286 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 FCN2Q15485 313 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 DEFB110Q30KQ9 67 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 GPR157Q5UAW9 335 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 IL20RBQ6UXL0 311 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 ENTHD1Q8IYW4 607 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 DNAJC22Q8N4W6 341 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 BACE2Q9Y5Z0 518 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 SLC16A6O15403 523 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 SLC2A5P22732 501 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 ARRB1P49407 418 aaPredicted RBP15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 ZNF91Q05481 1191 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 CTSL3PQ5NE16 218 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 AWAT2Q6E213 333 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 OR4F15Q8NGB8 312 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 DAZLQ92904 295 aaKnown RBP15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 UBXN10Q96LJ8 280 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 ZNF583Q96ND8 569 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 ZNF442Q9H7R0 627 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 NIT2Q9NQR4 276 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 INIPQ9NRY2 104 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 PPP4R1LQ9P1A2 415 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 UBE2J1Q9Y385 318 aaPredicted RBP15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 ANKRD28O15084 1053 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 NKX3-2P78367 333 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 ZNF169Q14929 603 aaPredicted RBP15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 SLC5A12Q1EHB4 618 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 PDSS1Q5T2R2 415 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 NADSYN1Q6IA69 706 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 KIAA1143Q96AT1 154 aaPredicted RBP15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 PINK1Q9BXM7 581 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 KCMF1Q9P0J7 381 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 NUMBLQ9Y6R0 609 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 ARID1BQ8NFD5 2236 aaPredicted RBP15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 RPS27AP62979 156 aaKnown RBP15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 UBA52P62987 128 aaKnown RBP15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 FIP1L1Q6UN15 594 aaKnown RBP15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 TMEM150AQ86TG1 271 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 ZNF761Q86XN6 746 aaPredicted RBP15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 OR5H2Q8NGV7 314 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 DCUN1D4Q92564 292 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 MS4A4EQ96PG1 132 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 PHB2Q99623 299 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 PDE7BQ9NP56 450 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 AKIP1Q9NQ31 210 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 MEPEQ9NQ76 525 aaPredicted RBP15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 CCL5P13501 91 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 RPS2P15880 293 aaKnown RBP15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 HLA-DMAP28067 261 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 SQSTM1Q13501 440 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 TAZQ16635 292 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 HSD11B1LQ7Z5J1 315 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 ZSCAN4Q8NAM6 433 aaPredicted RBP15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 HOXB13Q92826 284 aaPredicted RBP15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 ENY2Q9NPA8 101 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 CYP8B1Q9UNU6 501 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 SDC3O75056 442 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 NCR1O76036 304 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 TSPAN15O95858 294 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 ZNF865P0CJ78 1059 aaPredicted RBP15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 LIPCP11150 499 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 DAPP51397 102 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 ZNF84P51523 738 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 HBA1P69905 142 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 C14orf28Q4W4Y0 310 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 SLC16A9Q7RTY1 509 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 MAMDC2Q7Z304 686 aaPredicted RBP15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 PXKQ7Z7A4 578 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 CLDN22Q8N7P3 220 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 PRRC1Q96M27 445 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 LINC00597Q9H2U6 94 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 PELI2Q9HAT8 420 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 GMEB2Q9UKD1 530 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 OR52A4PA6NMU1 304 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 ARHGAP33O14559 1287 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 IFNA10P01566 189 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 IFNA4P05014 189 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 UGT2B7P16662 529 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 SOX9P48436 509 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 ZNF440Q8IYI8 595 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 ELP4Q96EB1 424 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 C4orf36Q96KX1 117 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 GALNT9Q9HCQ5 603 aa15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 TIMM8BQ9Y5J9 83 aaPredicted RBP15.48■□□□□ 0.07
SH3RF1-201ENST00000284637 PHYHO14832 338 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 FUT1P19526 365 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 NFYAP23511 347 aaPredicted RBP15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 DLSTP36957 453 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 CTSCP53634 463 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 COMTD1Q86VU5 262 aa15.47■□□□□ 0.07
SH3RF1-201ENST00000284637 TAS2R16Q9NYV7 291 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms