RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 MMP11P24347 488 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 CHMP24386 653 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 CDC42P60953 191 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 GABREP78334 506 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 PLAURQ03405 335 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 BROXQ5VW32 411 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 ZNF550Q7Z398 422 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 GDF7Q7Z4P5 450 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 ZER1Q7Z7L7 766 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 ZNF440Q8IYI8 595 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 ENTHD1Q8IYW4 607 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 RNF113BQ8IZP6 322 aaKnown RBP14.15□□□□□ -0.14
COPS3-201ENST00000268717 ZNF527Q8NB42 609 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 PIGXQ8TBF5 258 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 GNPDA2Q8TDQ7 276 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 ADNPQ9H2P0 1102 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 WDR54Q9H977 334 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 POLR1BQ9H9Y6 1135 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 DNAJB12Q9NXW2 375 aaKnown RBP14.15□□□□□ -0.14
COPS3-201ENST00000268717 SLC35A3Q9Y2D2 325 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 TPRKBQ9Y3C4 175 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 NPIPA5A0A0B4J1W7 369 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 NPIPA7E9PJI5 369 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 ABCB7O75027 752 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 HEXBP07686 556 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 NPIPA8P0DM63 369 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 POU2F1P14859 743 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 AGXTP21549 392 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 GPR143P51810 404 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 CDH15P55291 814 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 TSPAN31Q12999 210 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 PTGES3Q15185 160 aaKnown RBP14.15□□□□□ -0.14
COPS3-201ENST00000268717 NADK2Q4G0N4 442 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 C3orf38Q5JPI3 329 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 MRPL14Q6P1L8 145 aaKnown RBP14.15□□□□□ -0.14
COPS3-201ENST00000268717 MBOAT2Q6ZWT7 520 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 SLC29A4Q7RTT9 530 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 LAPTM4BQ86VI4 370 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 LSMEM1Q8N8F7 131 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 ZNF441Q8N8Z8 693 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 RHOXF1Q8NHV9 184 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 FAM81AQ8TBF8 368 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 HSPBAP1Q96EW2 488 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 LIN37Q96GY3 246 aaPredicted RBP14.15□□□□□ -0.14
COPS3-201ENST00000268717 NUDT9Q9BW91 350 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 TRIM2Q9C040 744 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 SEMA4CQ9C0C4 833 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 CCNB1IP1Q9NPC3 277 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 PLCXD1Q9NUJ7 323 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 SCN3BQ9NY72 215 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 AKAP7Q9P0M2 348 aaPredicted RBP14.15□□□□□ -0.14
COPS3-201ENST00000268717 RNF6Q9Y252 685 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 RAXQ9Y2V3 346 aa14.15□□□□□ -0.14
COPS3-201ENST00000268717 CCDC187A0A096LP49 1063 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 C2orf92A0A1B0GVN3 265 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 SERINC4A6NH21 518 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 SAGE2PA6NJ88 616 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 A8MUA0 341 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 IDSB3KWA1 339 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 TMX2-CTNND1H3BSU7 103 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 MEN1O00255 615 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 ALOX12BO75342 701 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 DXOO77932 396 aaKnown RBP14.14□□□□□ -0.15
COPS3-201ENST00000268717 THY1P04216 161 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 FPR3P25089 353 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 HTR2AP28223 471 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 TTKP33981 857 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 GSSP48637 474 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 OR1Q1Q15612 314 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 KLHL26Q53HC5 615 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 SLX4IPQ5VYV7 408 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 HLA-DQA1Q5Y7H0 255 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 IGF2-ASQ6U949 168 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 ZNF730Q6ZMV8 503 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 RRM2BQ7LG56 351 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 ANKRD37Q7Z713 158 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 SATL1Q86VE3 508 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 C9orf40Q8IXQ3 194 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 ZNF321PQ8N8H1 164 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 FAM71CQ8NEG0 241 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 WDR36Q8NI36 951 aaKnown RBP14.14□□□□□ -0.15
COPS3-201ENST00000268717 CNIH3Q8TBE1 160 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 TRUB1Q8WWH5 349 aaKnown RBP14.14□□□□□ -0.15
COPS3-201ENST00000268717 IPCEF1Q8WWN9 437 aaPredicted RBP14.14□□□□□ -0.15
COPS3-201ENST00000268717 METTL21AQ8WXB1 218 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 SPSB2Q99619 263 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 NXF5Q9H1B4 397 aaKnown RBP14.14□□□□□ -0.15
COPS3-201ENST00000268717 DUSP21Q9H596 190 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 TMEM27Q9HBJ8 222 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 APMAPQ9HDC9 416 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 VCX3AQ9NNX9 186 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 CTPS2Q9NRF8 586 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 UBQLN4Q9NRR5 601 aa14.14□□□□□ -0.15
COPS3-201ENST00000268717 C19orf25Q9UFG5 118 aaPredicted RBP14.14□□□□□ -0.15
COPS3-201ENST00000268717 KLF4O43474 513 aa14.13□□□□□ -0.15
COPS3-201ENST00000268717 TLX3O43711 291 aaPredicted RBP14.13□□□□□ -0.15
COPS3-201ENST00000268717 WBP4O75554 376 aaKnown RBP14.13□□□□□ -0.15
COPS3-201ENST00000268717 LYPD3O95274 346 aa14.13□□□□□ -0.15
COPS3-201ENST00000268717 TP53P04637 393 aaPredicted RBP14.13□□□□□ -0.15
COPS3-201ENST00000268717 NGFRP08138 427 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms