RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 A0A1W2PRQ8 180 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 FADS1O60427 444 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 F12P00748 615 aaPredicted RBP15.24■□□□□ 0.03
GPC1-201ENST00000264039 PPP3CBP16298 524 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 ATP5A1P25705 553 aaKnown RBP15.24■□□□□ 0.03
GPC1-201ENST00000264039 KCNJ3P48549 501 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 UBE2IP63279 158 aaKnown RBP15.24■□□□□ 0.03
GPC1-201ENST00000264039 VRK2Q86Y07 508 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 DVL3Q92997 716 aaPredicted RBP15.24■□□□□ 0.03
GPC1-201ENST00000264039 DERL3Q96Q80 235 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 GDF15Q99988 308 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 EFCAB11Q9BUY7 163 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 SMG9Q9H0W8 520 aaKnown RBP15.24■□□□□ 0.03
GPC1-201ENST00000264039 HCSTQ9UBK5 93 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 EEF1E1-BLOC1S5C9J1V9 151 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 RBBP9O75884 186 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 UBL3O95164 117 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 NDUFV2P19404 249 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 GATMP50440 423 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 CTSCP53634 463 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 CLDN2P57739 230 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 TMEM107Q6UX40 140 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 DGLUCYQ7Z3D6 616 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 PM20D2Q8IYS1 436 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 SCMH1Q96GD3 660 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 OR14A2Q96R54 314 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 OR1F2PQ96R84 312 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 CD180Q99467 661 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 HINT3Q9NQE9 182 aaKnown RBP15.24■□□□□ 0.03
GPC1-201ENST00000264039 A0A1B0GV50 99 aa15.23■□□□□ 0.03
GPC1-201ENST00000264039 M0R036 132 aa15.23■□□□□ 0.03
GPC1-201ENST00000264039 DCTDP32321 178 aa15.23■□□□□ 0.03
GPC1-201ENST00000264039 MAGEB1P43366 347 aa15.23■□□□□ 0.03
GPC1-201ENST00000264039 DLX5P56178 289 aa15.23■□□□□ 0.03
GPC1-201ENST00000264039 HLXQ14774 488 aaPredicted RBP15.23■□□□□ 0.03
GPC1-201ENST00000264039 GRHL2Q6ISB3 625 aa15.23■□□□□ 0.03
GPC1-201ENST00000264039 RAB11FIP2Q7L804 512 aa15.23■□□□□ 0.03
GPC1-201ENST00000264039 ZNF627Q7L945 461 aa15.23■□□□□ 0.03
GPC1-201ENST00000264039 CMTM8Q8IZV2 173 aa15.23■□□□□ 0.03
GPC1-201ENST00000264039 ZNF615Q8N8J6 731 aa15.23■□□□□ 0.03
GPC1-201ENST00000264039 INO80EQ8NBZ0 244 aaPredicted RBP15.23■□□□□ 0.03
GPC1-201ENST00000264039 GPR32P1Q8NGA4 272 aa15.23■□□□□ 0.03
GPC1-201ENST00000264039 OR2AP1Q8NGE2 309 aa15.23■□□□□ 0.03
GPC1-201ENST00000264039 HAVCR2Q8TDQ0 301 aa15.23■□□□□ 0.03
GPC1-201ENST00000264039 PDFQ9HBH1 243 aa15.23■□□□□ 0.03
GPC1-201ENST00000264039 LIPT1Q9Y234 373 aa15.23■□□□□ 0.03
GPC1-201ENST00000264039 IGLV3-10A0A075B6K4 115 aa15.23■□□□□ 0.03
GPC1-201ENST00000264039 RAD1O60671 282 aa15.23■□□□□ 0.03
GPC1-201ENST00000264039 NMBP08949 121 aa15.23■□□□□ 0.03
GPC1-201ENST00000264039 THAP4Q8WY91 577 aa15.23■□□□□ 0.03
GPC1-201ENST00000264039 SMPDL3BQ92485 455 aa15.23■□□□□ 0.03
GPC1-201ENST00000264039 FBXO17Q96EF6 278 aa15.23■□□□□ 0.03
GPC1-201ENST00000264039 ZC3HAV1LQ96H79 300 aaKnown RBP15.23■□□□□ 0.03
GPC1-201ENST00000264039 DPH7Q9BTV6 452 aa15.23■□□□□ 0.03
GPC1-201ENST00000264039 CA10Q9NS85 328 aa15.23■□□□□ 0.03
GPC1-201ENST00000264039 SLC25A13Q9UJS0 675 aa15.23■□□□□ 0.03
GPC1-201ENST00000264039 TRBV23-1A0A0A0MS06 115 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 A0A0U1RQF3 1178 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 STK25O00506 426 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 CA12O43570 354 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 SC5DO75845 299 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 C1GALT1C1LP0DN25 315 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 CXCL2P19875 107 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 MAT2AP31153 395 aaKnown RBP15.22■□□□□ 0.03
GPC1-201ENST00000264039 UBE2E3Q969T4 207 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 GPA33Q99795 319 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 ADAP2Q9NPF8 381 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 C1orf226A1L170 272 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 TMEM200CA6NKL6 621 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 ELFN1P0C7U0 828 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 POLR2LP62875 67 aaKnown RBP15.22■□□□□ 0.03
GPC1-201ENST00000264039 XKR4Q5GH76 650 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 C6orf132Q5T0Z8 1188 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 NKAIN4Q8IVV8 208 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 GAS2L1Q99501 681 aaPredicted RBP15.22■□□□□ 0.03
GPC1-201ENST00000264039 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.22■□□□□ 0.03
GPC1-201ENST00000264039 LDAHQ9H6V9 325 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 E9PI62 339 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 GMFGO60234 142 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 CR2P20023 1033 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 ART1P52961 327 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 RAB5BP61020 215 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 NKPD1Q17RQ9 610 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 ZNF750Q32MQ0 723 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 KRT77Q7Z794 578 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 OR4D11Q8NGI4 311 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 OR52H1Q8NGJ2 320 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 PTP4A1Q93096 173 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 ELP4Q96EB1 424 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 WDR89Q96FK6 387 aaPredicted RBP15.22■□□□□ 0.03
GPC1-201ENST00000264039 C16orf58Q96GQ5 468 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 USP36Q9P275 1121 aaKnown RBP15.22■□□□□ 0.03
GPC1-201ENST00000264039 KIF25Q9UIL4 384 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 BACE2Q9Y5Z0 518 aa15.22■□□□□ 0.03
GPC1-201ENST00000264039 CCSO14618 274 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 BET1O15155 118 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 USF2Q15853 346 aaPredicted RBP15.21■□□□□ 0.03
GPC1-201ENST00000264039 H3F3CQ6NXT2 135 aa15.21■□□□□ 0.03
GPC1-201ENST00000264039 GTPBP8Q8N3Z3 284 aaPredicted RBP15.21■□□□□ 0.03
GPC1-201ENST00000264039 KCT2Q8NC54 265 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms