RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 PIAS4Q8N2W9 510 aaPredicted RBP15.21■□□□□ 0.03
CTCF-201ENST00000264010 GRHL3Q8TE85 626 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 TANKQ92844 425 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 MRGPRX1Q96LB2 322 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 GABRG3Q99928 467 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 OR51V1Q9H2C8 321 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 SMURF1Q9HCE7 757 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 TBC1D24Q9ULP9 559 aa15.21■□□□□ 0.03
CTCF-201ENST00000264010 SPAG17Q6Q759 2223 aa15.21■□□□□ 0.02
CTCF-201ENST00000264010 UNC119BA6NIH7 251 aa15.21■□□□□ 0.02
CTCF-201ENST00000264010 SSX5O60225 188 aa15.21■□□□□ 0.02
CTCF-201ENST00000264010 RLN1P04808 185 aa15.21■□□□□ 0.02
CTCF-201ENST00000264010 SDC2P34741 201 aa15.21■□□□□ 0.02
CTCF-201ENST00000264010 HHEXQ03014 270 aa15.21■□□□□ 0.02
CTCF-201ENST00000264010 RAB40BQ12829 278 aa15.21■□□□□ 0.02
CTCF-201ENST00000264010 SLC16A11Q8NCK7 471 aa15.21■□□□□ 0.02
CTCF-201ENST00000264010 EGLN3Q9H6Z9 239 aa15.21■□□□□ 0.02
CTCF-201ENST00000264010 CD207Q9UJ71 328 aa15.21■□□□□ 0.02
CTCF-201ENST00000264010 CTDSP2O14595 271 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 SLITRK5O94991 958 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 GPR75O95800 540 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 WNT4P56705 351 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 LRIT3Q3SXY7 679 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 SLC30A6Q6NXT4 461 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 FAM180AQ6UWF9 173 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 LACC1Q8IV20 430 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 ZNF619Q8N2I2 560 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 FAM3CQ92520 227 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 RELTQ969Z4 430 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 S100PBPQ96BU1 408 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 A4GNTQ9UNA3 340 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 DAPL1A0PJW8 107 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 M0R082 166 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 B4GALT2O60909 372 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 LDB3O75112 727 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 HOXB3P14651 431 aaPredicted RBP15.2■□□□□ 0.02
CTCF-201ENST00000264010 MLLT11Q13015 90 aaPredicted RBP15.2■□□□□ 0.02
CTCF-201ENST00000264010 LHFPL3Q86UP9 236 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 ZNF761Q86XN6 746 aaPredicted RBP15.2■□□□□ 0.02
CTCF-201ENST00000264010 GID4Q8IVV7 300 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 OR10H4Q8NGA5 316 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 FANK1Q8TC84 345 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 DGAT2Q96PD7 388 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 PRR14Q9BWN1 585 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 ANKRD19PQ9H560 264 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 AKIP1Q9NQ31 210 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 SLC7A7Q9UM01 511 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 INMT-MINDY4F8WBC2 141 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 SCG5P05408 212 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 PXNP49023 591 aaPredicted RBP15.2■□□□□ 0.02
CTCF-201ENST00000264010 PDX1P52945 283 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 SMCO1Q147U7 214 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 LAIR1Q6GTX8 287 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 FAM26EQ8N5C1 309 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 FAM98AQ8NCA5 519 aaKnown RBP15.2■□□□□ 0.02
CTCF-201ENST00000264010 NELL2Q99435 816 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 PSD2Q9BQI7 771 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 LHX9Q9NQ69 397 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 OSGIN1Q9UJX0 560 aa15.2■□□□□ 0.02
CTCF-201ENST00000264010 A0A087WUU8 490 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 M0R233 179 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 FFAR1O14842 300 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 HLA-DPB1P04440 258 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 HOXC4P09017 264 aaPredicted RBP15.19■□□□□ 0.02
CTCF-201ENST00000264010 TGFBR1P36897 503 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 PGDP52209 483 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 CSTF1Q05048 431 aaKnown RBP15.19■□□□□ 0.02
CTCF-201ENST00000264010 CCNJQ5T5M9 372 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 HLA-DQA1Q5Y7H0 255 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 ZNF425Q6IV72 752 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 DAPP1Q9UN19 280 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 HS3ST3A1Q9Y663 406 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 PRKYO43930 277 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 PPM1BO75688 479 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 RNH1P13489 461 aaKnown RBP15.19■□□□□ 0.02
CTCF-201ENST00000264010 COL9A1P20849 921 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 FRKP42685 505 aaPredicted RBP15.19■□□□□ 0.02
CTCF-201ENST00000264010 TAGLNQ01995 201 aaKnown RBP15.19■□□□□ 0.02
CTCF-201ENST00000264010 CDK10Q15131 360 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 DCST2Q5T1A1 773 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 MRM1Q6IN84 353 aaKnown RBP15.19■□□□□ 0.02
CTCF-201ENST00000264010 HAGHLQ6PII5 290 aaPredicted RBP15.19■□□□□ 0.02
CTCF-201ENST00000264010 BCDIN3DQ7Z5W3 292 aaKnown RBP15.19■□□□□ 0.02
CTCF-201ENST00000264010 ZFPM2Q8WW38 1151 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 SLC35A4Q96G79 324 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 ZNF582Q96NG8 517 aaPredicted RBP15.19■□□□□ 0.02
CTCF-201ENST00000264010 RBCK1Q9BYM8 510 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 SLA2Q9H6Q3 261 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 IL21RQ9HBE5 538 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 Q9N2J8 555 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 GLTPQ9NZD2 209 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 MGAT4AQ9UM21 535 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 ECDO95905 644 aaPredicted RBP15.19■□□□□ 0.02
CTCF-201ENST00000264010 PTTG1O95997 202 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 ACP2P11117 423 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 ALG11Q2TAA5 492 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 SLC35F1Q5T1Q4 408 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 CXXC5Q7LFL8 322 aaKnown RBP15.19■□□□□ 0.02
CTCF-201ENST00000264010 MARCH9Q86YJ5 346 aa15.19■□□□□ 0.02
CTCF-201ENST00000264010 CDH10Q9Y6N8 788 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms