RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 INO80EQ8NBZ0 244 aaPredicted RBP7.87□□□□□ -1.15
LDB3-201ENST00000263066 OR10R2Q8NGX6 335 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 WBP2Q969T9 261 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 MRPS24Q96EL2 167 aaKnown RBP7.87□□□□□ -1.15
LDB3-201ENST00000263066 LINGO1Q96FE5 620 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 TBL1YQ9BQ87 522 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 TSSK6Q9BXA6 273 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 RIMS4Q9H426 269 aaPredicted RBP7.87□□□□□ -1.15
LDB3-201ENST00000263066 EQTNQ9NQ60 294 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 DCAF13Q9NV06 445 aaKnown RBP7.87□□□□□ -1.15
LDB3-201ENST00000263066 RHCGQ9UBD6 479 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 FLVCR2Q9UPI3 526 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 ERVW-1Q9UQF0 538 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 OR2AG2A6NM03 316 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 E7EQ34 232 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 M0QZQ0 153 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 CLDN4O14493 209 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 GOSR2O14653 212 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 MPZL2O60487 215 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 SLC19A2O60779 497 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 GJB3O75712 270 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 UROSP10746 265 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 ADH5P11766 374 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 RPS2P15880 293 aaKnown RBP7.87□□□□□ -1.15
LDB3-201ENST00000263066 CNR2P34972 360 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 SERPINF1P36955 418 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 PITPNBP48739 271 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 CCR9P51686 369 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 HCCSP53701 268 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 CAMK2DQ13557 499 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 HLXQ14774 488 aaPredicted RBP7.87□□□□□ -1.15
LDB3-201ENST00000263066 ARSIQ5FYB1 569 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 NKAPLQ5M9Q1 402 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 Q5PR19 223 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 CXXC5Q7LFL8 322 aaKnown RBP7.87□□□□□ -1.15
LDB3-201ENST00000263066 ZNF227Q86WZ6 799 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 NRROSQ86YC3 692 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 LDLRAD3Q86YD5 345 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 DUSP18Q8NEJ0 188 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 BTN2A2Q8WVV5 523 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 MRGPRX2Q96LB1 330 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 ALX4Q9H161 411 aaPredicted RBP7.87□□□□□ -1.15
LDB3-201ENST00000263066 GSTO2Q9H4Y5 243 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 ACTL8Q9H568 366 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 WDR26Q9H7D7 661 aa7.87□□□□□ -1.15
LDB3-201ENST00000263066 NDRG4Q9ULP0 352 aaKnown RBP7.87□□□□□ -1.15
LDB3-201ENST00000263066 NUP214P35658 2090 aaPredicted RBP7.86□□□□□ -1.15
LDB3-201ENST00000263066 A0A1B0GWJ7 208 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 GNG14A0A1W2PPG7 69 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 GABRDO14764 452 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 RGS14O43566 566 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 ICOSLGO75144 302 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 CLN5O75503 358 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 RECKO95980 971 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 COX5BP10606 129 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 PAX6P26367 422 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 DDTP30046 118 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 SOAT1P35610 550 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 SLC6A11P48066 632 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 AIMP2Q13155 320 aaKnown RBP7.86□□□□□ -1.15
LDB3-201ENST00000263066 ZNHIT3Q15649 155 aaPredicted RBP7.86□□□□□ -1.15
LDB3-201ENST00000263066 COQ5Q5HYK3 327 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 TPRG1Q6ZUI0 275 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 FAM46DQ8NEK8 389 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 HAVCR2Q8TDQ0 301 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 CCDC107Q8WV48 283 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 HLA-CQ95604 372 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 PIGMQ9H3S5 423 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 SUV39H2Q9H5I1 410 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 ZCCHC4Q9H5U6 513 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 BCO1Q9HAY6 547 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 GPR45Q9Y5Y3 372 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 ZCWPW2A0A1B0GU75 182 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 FZD7O75084 574 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 CLDN11O75508 207 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 ZNF432O94892 652 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 HLA-DPB1P04440 258 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 SERPINA4P29622 427 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 CD70P32970 193 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 CCR2P41597 374 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 CTSOP43234 321 aaPredicted RBP7.86□□□□□ -1.15
LDB3-201ENST00000263066 SELENOPP49908 381 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 SNRPD1P62314 119 aaKnown RBP7.86□□□□□ -1.15
LDB3-201ENST00000263066 NKX6-1P78426 367 aaPredicted RBP7.86□□□□□ -1.15
LDB3-201ENST00000263066 GBX1Q14549 363 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 ST3GAL2Q16842 350 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 C14orf28Q4W4Y0 310 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 ACTBL2Q562R1 376 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 LAIR1Q6GTX8 287 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 MRNIPQ6NTE8 343 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 PARM1Q6UWI2 310 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 VITQ6UXI7 678 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 ZNF546Q86UE3 836 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 SIAH3Q8IW03 269 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 KLHDC8BQ8IXV7 354 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 AQP11Q8NBQ7 271 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 CAMKVQ8NCB2 501 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 OR2A12Q8NGT7 310 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 GGACTQ9BVM4 153 aa7.86□□□□□ -1.15
LDB3-201ENST00000263066 NXF2Q9GZY0 626 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms