RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 CBR4Q8N4T8 237 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 OR10Q1Q8NGQ4 319 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 SLC38A5Q8WUX1 472 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 TMBIM1Q969X1 311 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 ANKRD9Q96BM1 317 aaPredicted RBP12.2□□□□□ -0.46
SGCA-201ENST00000262018 GIMAP5Q96F15 307 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 PEX11GQ96HA9 241 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 OSBPL10Q9BXB5 764 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 MKL2Q9ULH7 1088 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 SCN2AQ99250 2005 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 PRAMEF27A3QJZ7 478 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 TMEM247A6NEH6 219 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 C5orf58C9J3I9 102 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 PDLIM1O00151 329 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 SMNDC1O75940 238 aaKnown RBP eCLIP12.19□□□□□ -0.46
SGCA-201ENST00000262018 RAF1P04049 648 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 ATP1B1P05026 303 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 HMGN2P05204 90 aaKnown RBP12.19□□□□□ -0.46
SGCA-201ENST00000262018 FABP3P05413 133 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 BCHEP06276 602 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 SP1P08047 785 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 CYC1P08574 325 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 OR12D1P0DN82 309 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 ZNF23P17027 643 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 PPP2R1BP30154 601 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 HOXC12P31275 282 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 SOX18P35713 384 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 MAN2A2P49641 1150 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 OC90Q02509 493 aaPredicted RBP12.19□□□□□ -0.46
SGCA-201ENST00000262018 PMPCAQ10713 525 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 SNTB1Q13884 538 aaKnown RBP12.19□□□□□ -0.46
SGCA-201ENST00000262018 LASP1Q14847 261 aaKnown RBP12.19□□□□□ -0.46
SGCA-201ENST00000262018 NRF1Q16656 503 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 BTBD16Q32M84 506 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 IQCCQ4KMZ1 466 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 ZNF628Q5EBL2 1059 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 SLC25A25Q6KCM7 469 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 SZRD1Q7Z422 152 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 SHISA5Q8N114 240 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 LGI4Q8N135 537 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 OR2L13Q8N349 312 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 SVOPLQ8N434 492 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 OR7G2Q8NG99 324 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 ZNF675Q8TD23 568 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 KAT2AQ92830 837 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 RAB8BQ92930 207 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 TMEM19Q96HH6 336 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 C7orf34Q96L11 122 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 P2RX2Q9UBL9 471 aa12.19□□□□□ -0.46
SGCA-201ENST00000262018 A0A087WV62 115 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 A6NHS1 94 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 LDB3O75112 727 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 PDE9AO76083 593 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 SEC24DO94855 1032 aaPredicted RBP12.18□□□□□ -0.46
SGCA-201ENST00000262018 TNFAIP8O95379 198 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 PGM3O95394 542 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 PRKAG1P54619 331 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 NUP107P57740 925 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 IGLV3-21P80748 117 aaPredicted RBP12.18□□□□□ -0.46
SGCA-201ENST00000262018 VLDLRP98155 873 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 EPS8Q12929 822 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 KEAP1Q14145 624 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 IFI44LQ53G44 452 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 PRAMEF8Q5VWM4 474 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 PRAMEF7Q5VXH5 474 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 OR2T5Q6IEZ7 315 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 ARSKQ6UWY0 536 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 ARMC8Q8IUR7 673 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 ZNF595Q8IYB9 648 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 OR5D16Q8NGK9 328 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 OR2T29Q8NH02 315 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 XAGE5Q8WWM1 108 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 LZICQ8WZA0 190 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 TPD52L3Q96J77 140 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 RDH12Q96NR8 316 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 MS4A4EQ96PG1 132 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 MYCBPQ99417 103 aaPredicted RBP12.18□□□□□ -0.46
SGCA-201ENST00000262018 ACTRT3Q9BYD9 372 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 TP63Q9H3D4 680 aaPredicted RBP12.18□□□□□ -0.46
SGCA-201ENST00000262018 BCL2L10Q9HD36 194 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 MRPS33Q9Y291 106 aaKnown RBP12.18□□□□□ -0.46
SGCA-201ENST00000262018 AP4B1Q9Y6B7 739 aa12.18□□□□□ -0.46
SGCA-201ENST00000262018 HIVEP2P31629 2446 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 IGHV3-20A0A0C4DH32 117 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 DLGAP1O14490 977 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 GNGT2O14610 69 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 EI24O14681 340 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 CDC40O60508 579 aaKnown RBP eCLIP12.17□□□□□ -0.46
SGCA-201ENST00000262018 PLOD3O60568 738 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 CTNSO60931 367 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 ATE1O95260 518 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 OPN1SWP03999 348 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 SLC35E2P0CK97 266 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 CHN2P52757 468 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 PPP2R2BQ00005 443 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 ID2Q02363 134 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 MGAT2Q10469 447 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 GNA13Q14344 377 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 SYPL1Q16563 259 aa12.17□□□□□ -0.46
SGCA-201ENST00000262018 MEP1AQ16819 746 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms