RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 SDF2Q99470 211 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 SMURF1Q9HCE7 757 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 REV1Q9UBZ9 1251 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 DTX4Q9Y2E6 619 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 CHST2Q9Y4C5 530 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 AHCTF1Q8WYP5 2266 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 IGHV5-51A0A0C4DH38 117 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 ZAR1LA6NP61 321 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 SLITRK5O94991 958 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 GPR75O95800 540 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 OR1D5P58170 312 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 BNC1Q01954 994 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 FLYWCH1Q4VC44 716 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 PDZK1Q5T2W1 519 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 ZNF836Q6ZNA1 936 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 C19orf47Q8N9M1 422 aaKnown RBP13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 GATAD2BQ8WXI9 593 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 GIMAP5Q96F15 307 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 SLC41A3Q96GZ6 507 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 PRRC1Q96M27 445 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 SAP130Q9H0E3 1048 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 ERVK-19Q9WJR5 959 aa13.6□□□□□ -0.23
TRAFD1-201ENST00000257604 A0A1B0GVC2 190 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 OR6C70A6NIJ9 312 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 A6NIN4 97 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 DUXAA6NLW8 204 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 MYL12BO14950 172 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 AKR7A2O43488 359 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 GALR3O60755 368 aaPredicted RBP13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 BCKDHBP21953 392 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 GPR50Q13585 617 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 CDK10Q15131 360 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 CYB561A3Q8NBI2 242 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 OR51L1Q8NGJ5 315 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 CHAC2Q8WUX2 184 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 SAMD8Q96LT4 415 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 NRSN2Q9GZP1 204 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 OR51V1Q9H2C8 321 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 RPRD1BQ9NQG5 326 aaKnown RBP13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 PILRAQ9UKJ1 303 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 PCOLCE2Q9UKZ9 415 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 ZNF443Q9Y2A4 671 aaPredicted RBP13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 KIR2DS5A0A0G2JLQ3 304 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 A0A0G2JNG1 304 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 LRRN3E7EW58 273 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 KIR2DS3K7RE56 304 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 SMIM11AP58511 58 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 ZNF91Q05481 1191 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 ST3GAL3Q11203 375 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 KIR2DS5Q14953 304 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 TMPRSS11AQ6ZMR5 421 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 ATCAYQ86WG3 371 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 KIF18BQ86Y91 864 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 CA13Q8N1Q1 262 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 VWA5B2Q8N398 1253 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 SYT14Q8NB59 555 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 RIT1Q92963 219 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 OR8D2Q9GZM6 311 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 LRRN3Q9H3W5 708 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 CFL2Q9Y281 166 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 TRAV27A0A087WT01 109 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 GYPBP06028 91 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 MRPL3P09001 348 aaKnown RBP13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 LIMS1P48059 325 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 HMGA2P52926 109 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 KRR1Q13601 381 aaKnown RBP13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 GDF7Q7Z4P5 450 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 BBS1Q8NFJ9 593 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 OR4F15Q8NGB8 312 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 OR8D4Q8NGM9 314 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 PIGXQ8TBF5 258 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 ASB15Q8WXK1 588 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 PINK1Q9BXM7 581 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 SLC7A5P2Q9GIP4 190 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 ZSCAN32Q9NX65 697 aa13.59□□□□□ -0.23
TRAFD1-201ENST00000257604 PLD2O14939 933 aa13.58□□□□□ -0.24
TRAFD1-201ENST00000257604 TMCC2O75069 709 aa13.58□□□□□ -0.24
TRAFD1-201ENST00000257604 NOS3P29474 1203 aa13.58□□□□□ -0.24
TRAFD1-201ENST00000257604 UBE2IP63279 158 aaKnown RBP13.58□□□□□ -0.24
TRAFD1-201ENST00000257604 CSNK2BP67870 215 aa13.58□□□□□ -0.24
TRAFD1-201ENST00000257604 TRAM2Q15035 370 aa13.58□□□□□ -0.24
TRAFD1-201ENST00000257604 ZNF79Q15937 498 aa13.58□□□□□ -0.24
TRAFD1-201ENST00000257604 CCDC157Q569K6 752 aa13.58□□□□□ -0.24
TRAFD1-201ENST00000257604 FAM209AQ5JX71 171 aa13.58□□□□□ -0.24
TRAFD1-201ENST00000257604 RFPL4BQ6ZWI9 263 aa13.58□□□□□ -0.24
TRAFD1-201ENST00000257604 SYT13Q7L8C5 426 aa13.58□□□□□ -0.24
TRAFD1-201ENST00000257604 CNOT9Q92600 299 aaKnown RBP13.58□□□□□ -0.24
TRAFD1-201ENST00000257604 TRIM45Q9H8W5 580 aaPredicted RBP13.58□□□□□ -0.24
TRAFD1-201ENST00000257604 C20orf141Q9NUB4 165 aa13.58□□□□□ -0.24
TRAFD1-201ENST00000257604 CPED1A4D0V7 1026 aa13.58□□□□□ -0.24
TRAFD1-201ENST00000257604 TBX19O60806 448 aa13.58□□□□□ -0.24
TRAFD1-201ENST00000257604 CDRT1O95170 752 aa13.58□□□□□ -0.24
TRAFD1-201ENST00000257604 IL7P13232 177 aa13.58□□□□□ -0.24
TRAFD1-201ENST00000257604 GABRB1P18505 474 aa13.58□□□□□ -0.24
TRAFD1-201ENST00000257604 ELOCQ15369 112 aa13.58□□□□□ -0.24
TRAFD1-201ENST00000257604 LRIT1Q9P2V4 623 aa13.58□□□□□ -0.24
TRAFD1-201ENST00000257604 KCND3Q9UK17 655 aa13.58□□□□□ -0.24
TRAFD1-201ENST00000257604 SDK2Q58EX2 2172 aa13.57□□□□□ -0.24
TRAFD1-201ENST00000257604 CDC42EP2O14613 210 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms