RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 C7orf72A4D263 438 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 SYT5O00445 386 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 UBDO15205 165 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 TNFRSF21O75509 655 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 STX11O75558 287 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 GSNP06396 782 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 SSTR2P30874 369 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 OPRM1P35372 400 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 CHI3L1P36222 383 aaPredicted RBP20.68■□□□□ 0.9
LSM4-201ENST00000252816 PPP2R2AP63151 447 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 FUT5Q11128 374 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 SNTB1Q13884 538 aaKnown RBP20.68■□□□□ 0.9
LSM4-201ENST00000252816 GPR68Q15743 365 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 FBXL19-AS1Q494R0 122 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 PDZK1Q5T2W1 519 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 C16orf62Q7Z3J2 963 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 GGNQ86UU5 652 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 GCNT2Q8N0V5 402 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 ZNF614Q8N883 585 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 OR9I1Q8NGQ6 314 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 POC1BQ8TC44 478 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 ZBTB8AQ96BR9 441 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 ZNF845Q96IR2 970 aaPredicted RBP20.68■□□□□ 0.9
LSM4-201ENST00000252816 RNF145Q96MT1 663 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 ZFP3Q96NJ6 502 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 EXD2Q9NVH0 621 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 ZIM2Q9NZV7 527 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 MKLN1Q9UL63 735 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 ICAM5Q9UMF0 924 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 L3MBTL1Q9Y468 752 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 MED12LQ86YW9 2145 aa20.68■□□□□ 0.9
LSM4-201ENST00000252816 PDZD2O15018 2839 aa20.67■□□□□ 0.9
LSM4-201ENST00000252816 PRAMEF27A3QJZ7 478 aa20.67■□□□□ 0.9
LSM4-201ENST00000252816 H3BNH8 94 aa20.67■□□□□ 0.9
LSM4-201ENST00000252816 LINGO3P0C6S8 592 aa20.67■□□□□ 0.9
LSM4-201ENST00000252816 UQCRC1P31930 480 aa20.67■□□□□ 0.9
LSM4-201ENST00000252816 ZNF41P51814 821 aaPredicted RBP20.67■□□□□ 0.9
LSM4-201ENST00000252816 KRTAP10-9P60411 292 aa20.67■□□□□ 0.9
LSM4-201ENST00000252816 ZNF621Q6ZSS3 439 aa20.67■□□□□ 0.9
LSM4-201ENST00000252816 CHMP1BQ7LBR1 199 aa20.67■□□□□ 0.9
LSM4-201ENST00000252816 RNF130Q86XS8 419 aa20.67■□□□□ 0.9
LSM4-201ENST00000252816 DYDC1Q8WWB3 177 aa20.67■□□□□ 0.9
LSM4-201ENST00000252816 FIG4Q92562 907 aa20.67■□□□□ 0.9
LSM4-201ENST00000252816 ZNF524Q96C55 264 aa20.67■□□□□ 0.9
LSM4-201ENST00000252816 PINK1Q9BXM7 581 aa20.67■□□□□ 0.9
LSM4-201ENST00000252816 SLC6A13Q9NSD5 602 aa20.67■□□□□ 0.9
LSM4-201ENST00000252816 INTS9Q9NV88 658 aaKnown RBP20.67■□□□□ 0.9
LSM4-201ENST00000252816 JKAMPQ9P055 326 aa20.67■□□□□ 0.9
LSM4-201ENST00000252816 CREBBPQ92793 2442 aa20.67■□□□□ 0.9
LSM4-201ENST00000252816 CSMD2Q7Z408 3487 aa20.67■□□□□ 0.9
LSM4-201ENST00000252816 SLC22A20A6NK97 555 aa20.66■□□□□ 0.9
LSM4-201ENST00000252816 UGT2B17O75795 530 aa20.66■□□□□ 0.9
LSM4-201ENST00000252816 OPN1LWP04000 364 aa20.66■□□□□ 0.9
LSM4-201ENST00000252816 IL6P05231 212 aa20.66■□□□□ 0.9
LSM4-201ENST00000252816 KHKP50053 298 aa20.66■□□□□ 0.9
LSM4-201ENST00000252816 IDH3AP50213 366 aa20.66■□□□□ 0.9
LSM4-201ENST00000252816 EEFSECP57772 596 aaKnown RBP20.66■□□□□ 0.9
LSM4-201ENST00000252816 TLE4Q04727 773 aa20.66■□□□□ 0.9
LSM4-201ENST00000252816 ZNF141Q15928 474 aa20.66■□□□□ 0.9
LSM4-201ENST00000252816 ATAD3BQ5T9A4 648 aa20.66■□□□□ 0.9
LSM4-201ENST00000252816 METTL25Q8N6Q8 603 aa20.66■□□□□ 0.9
LSM4-201ENST00000252816 RNASE6Q93091 150 aaKnown RBP20.66■□□□□ 0.9
LSM4-201ENST00000252816 EBF4Q9BQW3 602 aa20.66■□□□□ 0.9
LSM4-201ENST00000252816 SFXN3Q9BWM7 321 aa20.66■□□□□ 0.9
LSM4-201ENST00000252816 POLQO75417 2590 aa20.66■□□□□ 0.9
LSM4-201ENST00000252816 SERINC4A6NH21 518 aa20.65■□□□□ 0.9
LSM4-201ENST00000252816 EEF1E1-BLOC1S5C9J1V9 151 aa20.65■□□□□ 0.9
LSM4-201ENST00000252816 GTPBP1O00178 669 aaKnown RBP20.65■□□□□ 0.9
LSM4-201ENST00000252816 HMGN4O00479 90 aa20.65■□□□□ 0.9
LSM4-201ENST00000252816 EEF1E1O43324 174 aaKnown RBP20.65■□□□□ 0.9
LSM4-201ENST00000252816 KIAA0513O60268 411 aa20.65■□□□□ 0.9
LSM4-201ENST00000252816 TGDSO95455 350 aa20.65■□□□□ 0.9
LSM4-201ENST00000252816 AGR2O95994 175 aa20.65■□□□□ 0.9
LSM4-201ENST00000252816 IL11P20809 199 aa20.65■□□□□ 0.9
LSM4-201ENST00000252816 P2RX1P51575 399 aa20.65■□□□□ 0.9
LSM4-201ENST00000252816 SUMO3P55854 103 aaPredicted RBP20.65■□□□□ 0.9
LSM4-201ENST00000252816 LRRC74AQ0VAA2 488 aa20.65■□□□□ 0.9
LSM4-201ENST00000252816 FOXF1Q12946 379 aa20.65■□□□□ 0.9
LSM4-201ENST00000252816 TOMM34Q15785 309 aaPredicted RBP20.65■□□□□ 0.9
LSM4-201ENST00000252816 MAPK14Q16539 360 aa20.65■□□□□ 0.9
LSM4-201ENST00000252816 TYW3Q6IPR3 259 aaKnown RBP20.65■□□□□ 0.9
LSM4-201ENST00000252816 DNAJC14Q6Y2X3 702 aaPredicted RBP20.65■□□□□ 0.9
LSM4-201ENST00000252816 P4HA3Q7Z4N8 544 aa20.65■□□□□ 0.9
LSM4-201ENST00000252816 MIER2Q8N344 545 aa20.65■□□□□ 0.9
LSM4-201ENST00000252816 TRIML2Q8N7C3 387 aa20.65■□□□□ 0.9
LSM4-201ENST00000252816 FNDC9Q8TBE3 224 aa20.65■□□□□ 0.9
LSM4-201ENST00000252816 GPR119Q8TDV5 335 aa20.65■□□□□ 0.9
LSM4-201ENST00000252816 ROPN1LQ96C74 230 aa20.65■□□□□ 0.9
LSM4-201ENST00000252816 LURAP1Q96LR2 239 aa20.65■□□□□ 0.9
LSM4-201ENST00000252816 TMEM185BQ9H7F4 350 aa20.65■□□□□ 0.9
LSM4-201ENST00000252816 TCF7L2Q9NQB0 619 aa20.65■□□□□ 0.9
LSM4-201ENST00000252816 ANKHD1Q8IWZ3 2542 aaKnown RBP20.64■□□□□ 0.9
LSM4-201ENST00000252816 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.64■□□□□ 0.89
LSM4-201ENST00000252816 A0A1W2PNV4 684 aa20.64■□□□□ 0.89
LSM4-201ENST00000252816 RFXANKO14593 260 aa20.64■□□□□ 0.89
LSM4-201ENST00000252816 TNFSF13O75888 250 aa20.64■□□□□ 0.89
LSM4-201ENST00000252816 NUDT14O95848 222 aa20.64■□□□□ 0.89
LSM4-201ENST00000252816 GUSBP08236 651 aa20.64■□□□□ 0.89
LSM4-201ENST00000252816 UBL4AP11441 157 aa20.64■□□□□ 0.89
LSM4-201ENST00000252816 POLR2JP52435 117 aaKnown RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms