RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 PEX5LQ8IYB4 626 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 TOR1AIP2Q8NFQ8 470 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 OR2M3Q8NG83 312 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 B4GALNT2Q8NHY0 566 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 ABTB1Q969K4 478 aaPredicted RBP10.25□□□□□ -0.77
SF3B6-201ENST00000233468 ZBTB8AQ96BR9 441 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 SFXN2Q96NB2 322 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 PIGQQ9BRB3 760 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 SAP130Q9H0E3 1048 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 SLC52A3Q9NQ40 469 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.25□□□□□ -0.77
SF3B6-201ENST00000233468 FBXO34Q9NWN3 711 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 GID8Q9NWU2 228 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 FLRT3Q9NZU0 649 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 MED11Q9P086 117 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 FBXL2Q9UKC9 423 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 PRDM4Q9UKN5 801 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 MKLN1Q9UL63 735 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 SLC35A3Q9Y2D2 325 aa10.25□□□□□ -0.77
SF3B6-201ENST00000233468 POLQO75417 2590 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 A0A0G2JPF8 293 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 SERINC4A6NH21 518 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 AHRRA9YTQ3 701 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 HNRNPCL2B2RXH8 293 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 HNRNPCL3B7ZW38 293 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 E9PLN8 166 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 NPIPB9F8W1W9 429 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 CCL21O00585 134 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 ZNF264O43296 627 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 SNX3O60493 162 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 FCMRO60667 390 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 HNRNPCL1O60812 293 aaKnown RBP10.24□□□□□ -0.77
SF3B6-201ENST00000233468 H6PDO95479 791 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 DBIP07108 87 aaKnown RBP10.24□□□□□ -0.77
SF3B6-201ENST00000233468 HNRNPCL4P0DMR1 293 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 UBL4AP11441 157 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 UQCRBP14927 111 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 POU3F2P20265 443 aaPredicted RBP10.24□□□□□ -0.77
SF3B6-201ENST00000233468 CHMP24386 653 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 EIF1P41567 113 aaKnown RBP10.24□□□□□ -0.77
SF3B6-201ENST00000233468 P2RX1P51575 399 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 SMSP52788 366 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 EEFSECP57772 596 aaKnown RBP10.24□□□□□ -0.77
SF3B6-201ENST00000233468 C3AR1Q16581 482 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 WIPI1Q5MNZ9 446 aaPredicted RBP10.24□□□□□ -0.77
SF3B6-201ENST00000233468 COX20Q5RI15 118 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 PDZK1Q5T2W1 519 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 GCNT6Q5T4J0 391 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 RAET1LQ5VY80 246 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 TYW3Q6IPR3 259 aaKnown RBP10.24□□□□□ -0.77
SF3B6-201ENST00000233468 RPTNQ6XPR3 784 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 ZAR1Q86SH2 424 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 CD163Q86VB7 1156 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 FJX1Q86VR8 437 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 RP9Q8TA86 221 aaKnown RBP10.24□□□□□ -0.77
SF3B6-201ENST00000233468 CMTM5Q96DZ9 223 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 C1GALT1C1Q96EU7 318 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 CGREF1Q99674 301 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 VKORC1Q9BQB6 163 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 THUMPD3Q9BV44 507 aaKnown RBP10.24□□□□□ -0.77
SF3B6-201ENST00000233468 SLC6A15Q9H2J7 730 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 SLC6A13Q9NSD5 602 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 ZNF232Q9UNY5 417 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 AP3M1Q9Y2T2 418 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 PKDREJQ9NTG1 2253 aa10.24□□□□□ -0.77
SF3B6-201ENST00000233468 UGT2B17O75795 530 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 NUDT14O95848 222 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 CSTAP01040 98 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 TFPTP0C1Z6 253 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 BMP2P12643 396 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 PEPDP12955 493 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 ETFAP13804 333 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 IL7RP16871 459 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 ZNF17P17021 662 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 DRD4P21917 467 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 ACVR2AP27037 513 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 MVDP53602 400 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 GYS2P54840 703 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 CHRNEQ04844 493 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 CBFBQ13951 182 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 LARS2Q15031 903 aaKnown RBP10.23□□□□□ -0.77
SF3B6-201ENST00000233468 BCL2A1Q16548 175 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 SYPL1Q16563 259 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 TRMT5Q32P41 509 aaKnown RBP10.23□□□□□ -0.77
SF3B6-201ENST00000233468 GTDC1Q4AE62 458 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 EIPR1Q53HC9 387 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 RUNDC3AQ59EK9 446 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 SP5Q6BEB4 398 aaPredicted RBP10.23□□□□□ -0.77
SF3B6-201ENST00000233468 VASNQ6EMK4 673 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 ZNF585AQ6P3V2 769 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 APOOLQ6UXV4 268 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 DLEU7Q6UYE1 221 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 FRRS1Q6ZNA5 592 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 CHMP1BQ7LBR1 199 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 MTDHQ86UE4 582 aaKnown RBP10.23□□□□□ -0.77
SF3B6-201ENST00000233468 KRT73Q86Y46 540 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 DOLPP1Q86YN1 238 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 SLC30A8Q8IWU4 369 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 TMCO5AQ8N6Q1 288 aa10.23□□□□□ -0.77
SF3B6-201ENST00000233468 ANKFN1Q8N957 763 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms