RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 IRAK3Q9Y616 596 aa13.23□□□□□ -0.29
PCDHB3-201ENST00000231130 CDH23Q9H251 3354 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 A8MXK9 166 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 PLPP1O14494 284 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 ADAMTS4O75173 837 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 C1orf105O95561 183 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 ACP5P13686 325 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 VEGFCP49767 419 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 SMIM11AP58511 58 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 TAP2Q03519 686 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 RBMS2Q15434 407 aaKnown RBP13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 TCEA2Q15560 299 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 HFEQ30201 348 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 C11orf88Q6PI97 169 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 ZNF783Q6ZMS7 281 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 ZNF461Q8TAF7 563 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 EFCAB11Q9BUY7 163 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 OSGEPL1Q9H4B0 414 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 TRDV1A0A1B0GX56 115 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 GPR31O00270 319 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 KPNA3O00505 521 aaPredicted RBP13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 MAGEB4O15481 346 aaPredicted RBP13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 SLC19A2O60779 497 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 TGM6O95932 706 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 CAPZA1P52907 286 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 GSG1Q2KHT4 349 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 NXPE4Q6UWF7 544 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 DEFB128Q7Z7B8 93 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 OR13C5Q8NGS8 318 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 ZNF707Q96C28 371 aaPredicted RBP13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 SLC35G5Q96KT7 338 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 C10orf90Q96M02 699 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 SLC25A13Q9UJS0 675 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 SLC22A7Q9Y694 548 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 SIRT4Q9Y6E7 314 aaPredicted RBP13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 PLXNA3P51805 1871 aa13.22□□□□□ -0.29
PCDHB3-201ENST00000231130 A0A1W2PRU2 124 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 NPC1O15118 1278 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 TBXA2RP21731 343 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 RPL3P39023 403 aaKnown RBP13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 DGCR2P98153 550 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 ELAVL2Q12926 359 aaKnown RBP13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 PLBD1Q6P4A8 553 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 Q6ZTK2 550 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 TMEM25Q86YD3 366 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 CDH26Q8IXH8 852 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 KCT2Q8NC54 265 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 SFT2D1Q8WV19 159 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 ADAMTS14Q8WXS8 1223 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 WDR89Q96FK6 387 aaPredicted RBP13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 C16orf58Q96GQ5 468 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 AHCYL2Q96HN2 611 aaKnown RBP13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 SCLYQ96I15 445 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 BBS4Q96RK4 519 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 GSN-AS1Q9NRJ2 163 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 MED11Q9P086 117 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 PURGQ9UJV8 347 aaKnown RBP13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 K7ESM1 405 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 STK25O00506 426 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 POLR2LP62875 67 aaKnown RBP13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 SLC25A35Q3KQZ1 300 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 RNF180Q86T96 592 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 TMEM150AQ86TG1 271 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 VRK2Q86Y07 508 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 CCDC116Q8IYX3 515 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 KRT78Q8N1N4 520 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 SCARB1Q8WTV0 552 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 APOBEC4Q8WW27 367 aaKnown RBP13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 SYT17Q9BSW7 474 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 EXOSC1Q9Y3B2 195 aaKnown RBP13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 KCNE3Q9Y6H6 103 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 SCN2AQ99250 2005 aa13.21□□□□□ -0.29
PCDHB3-201ENST00000231130 TMEM129A0AVI4 362 aa13.21□□□□□ -0.3
PCDHB3-201ENST00000231130 ZNF593O00488 134 aaPredicted RBP13.21□□□□□ -0.3
PCDHB3-201ENST00000231130 PGRMC2O15173 223 aa13.21□□□□□ -0.3
PCDHB3-201ENST00000231130 EIF3GO75821 320 aaKnown RBP eCLIP13.21□□□□□ -0.3
PCDHB3-201ENST00000231130 ELFN1P0C7U0 828 aa13.21□□□□□ -0.3
PCDHB3-201ENST00000231130 CLDN2P57739 230 aa13.21□□□□□ -0.3
PCDHB3-201ENST00000231130 C21orf58P58505 322 aa13.21□□□□□ -0.3
PCDHB3-201ENST00000231130 SNRPEP62304 92 aaKnown RBP13.21□□□□□ -0.3
PCDHB3-201ENST00000231130 C18orf63Q68DL7 685 aa13.21□□□□□ -0.3
PCDHB3-201ENST00000231130 RBMS3Q6XE24 437 aaKnown RBP13.21□□□□□ -0.3
PCDHB3-201ENST00000231130 NKAIN4Q8IVV8 208 aa13.21□□□□□ -0.3
PCDHB3-201ENST00000231130 HDDC3Q8N4P3 179 aa13.21□□□□□ -0.3
PCDHB3-201ENST00000231130 FBXO15Q8NCQ5 510 aaPredicted RBP13.21□□□□□ -0.3
PCDHB3-201ENST00000231130 TMEM185AQ8NFB2 350 aa13.21□□□□□ -0.3
PCDHB3-201ENST00000231130 OR10K1Q8NGX5 313 aa13.21□□□□□ -0.3
PCDHB3-201ENST00000231130 TRMT10AQ8TBZ6 339 aaKnown RBP13.21□□□□□ -0.3
PCDHB3-201ENST00000231130 HGDQ93099 445 aa13.21□□□□□ -0.3
PCDHB3-201ENST00000231130 GLYATL1Q969I3 302 aa13.21□□□□□ -0.3
PCDHB3-201ENST00000231130 CXorf40BQ96DE9 158 aa13.21□□□□□ -0.3
PCDHB3-201ENST00000231130 NEURL3Q96EH8 262 aa13.21□□□□□ -0.3
PCDHB3-201ENST00000231130 ORAI3Q9BRQ5 295 aa13.21□□□□□ -0.3
PCDHB3-201ENST00000231130 SLC6A20Q9NP91 592 aa13.21□□□□□ -0.3
PCDHB3-201ENST00000231130 P2RX2Q9UBL9 471 aa13.21□□□□□ -0.3
PCDHB3-201ENST00000231130 SCN3AQ9NY46 2000 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 A0A1B0GW55 424 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 UBXN7O94888 489 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 DUX4L2P0CJ85 424 aa13.2□□□□□ -0.3
PCDHB3-201ENST00000231130 DUX4L3P0CJ86 424 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms