RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 ZNF514Q96K75 400 aaPredicted RBP11.54□□□□□ -0.56
NUP88-201ENST00000225696 C1QTNF6Q9BXI9 259 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 ZBP1Q9H171 429 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 KCNN2Q9H2S1 579 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 OR52D1Q9H346 318 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 EMC7Q9NPA0 242 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 MRPL15Q9P015 296 aaKnown RBP11.54□□□□□ -0.56
NUP88-201ENST00000225696 KCMF1Q9P0J7 381 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 ADAM29Q9UKF5 820 aa11.54□□□□□ -0.56
NUP88-201ENST00000225696 RANBP2P49792 3224 aaKnown RBP11.53□□□□□ -0.56
NUP88-201ENST00000225696 SYNDIG1LA6NDD5 238 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 HIDE1A8MVS5 230 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 CDK2AP1O14519 115 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 SCAMP1O15126 338 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 WNT1P04628 370 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 GYPBP06028 91 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 ADRB1P08588 477 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 GKN3PP0CG01 181 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 ANXA3P12429 323 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 ATF1P18846 271 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 M6PRP20645 277 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 HIST1H1TP22492 207 aaPredicted RBP11.53□□□□□ -0.56
NUP88-201ENST00000225696 TEAD1P28347 426 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 SELENOPP49908 381 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 ZNF81P51508 661 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 SLC16A1P53985 500 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 DPTQ07507 201 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 CRYZQ08257 329 aaKnown RBP11.53□□□□□ -0.56
NUP88-201ENST00000225696 GSG1Q2KHT4 349 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 CCNJQ5T5M9 372 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 GPR139Q6DWJ6 353 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 TMEM64Q6YI46 380 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 MEPCEQ7L2J0 689 aaKnown RBP11.53□□□□□ -0.56
NUP88-201ENST00000225696 C16orf62Q7Z3J2 963 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 BPHLQ86WA6 291 aaPredicted RBP11.53□□□□□ -0.56
NUP88-201ENST00000225696 CYB561A3Q8NBI2 242 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 OR5J2Q8NH18 312 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 LRRC20Q8TCA0 184 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 GANCQ8TET4 914 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 LRIG1Q96JA1 1093 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 PGLYRP3Q96LB9 341 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 RBP7Q96R05 134 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 PRSS27Q9BQR3 290 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 CACNG6Q9BXT2 260 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 OR51V1Q9H2C8 321 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 DPAGT1Q9H3H5 408 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 PRKAG2Q9UGJ0 569 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 FLVCR2Q9UPI3 526 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 ENTPD4Q9Y227 616 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 MYO15AQ9UKN7 3530 aa11.53□□□□□ -0.56
NUP88-201ENST00000225696 J3QLW9 94 aa11.52□□□□□ -0.56
NUP88-201ENST00000225696 FGF18O76093 207 aa11.52□□□□□ -0.56
NUP88-201ENST00000225696 CXCL14O95715 111 aa11.52□□□□□ -0.56
NUP88-201ENST00000225696 HRGP04196 525 aa11.52□□□□□ -0.56
NUP88-201ENST00000225696 PCCBP05166 539 aa11.52□□□□□ -0.56
NUP88-201ENST00000225696 ZNF19P17023 458 aa11.52□□□□□ -0.56
NUP88-201ENST00000225696 PAICSP22234 425 aaKnown RBP11.52□□□□□ -0.56
NUP88-201ENST00000225696 ATP5A1P25705 553 aaKnown RBP11.52□□□□□ -0.56
NUP88-201ENST00000225696 ZNF267Q14586 743 aaPredicted RBP11.52□□□□□ -0.56
NUP88-201ENST00000225696 ANGPT1Q15389 498 aa11.52□□□□□ -0.56
NUP88-201ENST00000225696 TMEM255AQ5JRV8 349 aa11.52□□□□□ -0.56
NUP88-201ENST00000225696 TMEM65Q6PI78 240 aa11.52□□□□□ -0.56
NUP88-201ENST00000225696 FRRS1Q6ZNA5 592 aa11.52□□□□□ -0.56
NUP88-201ENST00000225696 TOMM5Q8N4H5 51 aa11.52□□□□□ -0.56
NUP88-201ENST00000225696 GIMAP1Q8WWP7 306 aa11.52□□□□□ -0.56
NUP88-201ENST00000225696 CDS1Q92903 461 aa11.52□□□□□ -0.56
NUP88-201ENST00000225696 ORAI1Q96D31 301 aa11.52□□□□□ -0.56
NUP88-201ENST00000225696 MSANTD3Q96H12 275 aa11.52□□□□□ -0.56
NUP88-201ENST00000225696 PEX11GQ96HA9 241 aa11.52□□□□□ -0.56
NUP88-201ENST00000225696 C4orf36Q96KX1 117 aa11.52□□□□□ -0.56
NUP88-201ENST00000225696 JAM3Q9BX67 310 aa11.52□□□□□ -0.56
NUP88-201ENST00000225696 RANBP3Q9H6Z4 567 aaPredicted RBP11.52□□□□□ -0.56
NUP88-201ENST00000225696 AUNIPQ9H7T9 357 aa11.52□□□□□ -0.56
NUP88-201ENST00000225696 MED17Q9NVC6 651 aa11.52□□□□□ -0.56
NUP88-201ENST00000225696 NKIRAS2Q9NYR9 191 aa11.52□□□□□ -0.56
NUP88-201ENST00000225696 PHF11Q9UIL8 331 aa11.52□□□□□ -0.56
NUP88-201ENST00000225696 A0A1W2PRG6 482 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 OTOL1A6NHN0 477 aaPredicted RBP11.52□□□□□ -0.57
NUP88-201ENST00000225696 BHLHE40O14503 412 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 VEGFDO43915 354 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 CLEC3AO75596 197 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 F3P13726 295 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 HTR2AP28223 471 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 ZNF136P52737 540 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 PRDX1Q06830 199 aaKnown RBP11.52□□□□□ -0.57
NUP88-201ENST00000225696 GALEQ14376 348 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 ARHGAP19Q14CB8 494 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 MFSD13AQ14CX5 517 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 DHCR24Q15392 516 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 MAPK14Q16539 360 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 PUS10Q3MIT2 529 aaKnown RBP11.52□□□□□ -0.57
NUP88-201ENST00000225696 CD276Q5ZPR3 534 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 MRM1Q6IN84 353 aaKnown RBP11.52□□□□□ -0.57
NUP88-201ENST00000225696 ABHD17CQ6PCB6 329 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 ADGRD2Q7Z7M1 963 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 COMMD7Q86VX2 200 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 PIAS4Q8N2W9 510 aaPredicted RBP11.52□□□□□ -0.57
NUP88-201ENST00000225696 OR7G2Q8NG99 324 aa11.52□□□□□ -0.57
NUP88-201ENST00000225696 DACT3Q96B18 629 aaPredicted RBP11.52□□□□□ -0.57
NUP88-201ENST00000225696 COX14Q96I36 57 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms