RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 CLEC2LP0C7M8 214 aa8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 AVPR1BP47901 424 aa8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 DHPSP49366 369 aaPredicted RBP8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 STARP49675 285 aa8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 PCBP3P57721 371 aaKnown RBP8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 OR2B6P58173 313 aa8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 STX4Q12846 297 aa8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 ODF1Q14990 250 aa8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 GPR68Q15743 365 aa8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 MICAQ29983 383 aa8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 ZFP69Q49AA0 526 aa8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 AADACL4Q5VUY2 407 aa8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 MLIPQ5VWP3 458 aa8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 NKAIN2Q5VXU1 208 aa8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 KDM4DQ6B0I6 523 aa8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 FAM111BQ6SJ93 734 aa8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 C19orf47Q8N9M1 422 aaKnown RBP8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 FAM83FQ8NEG4 500 aaPredicted RBP8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 FLVCR1-AS1Q8TAF5 88 aa8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 UBE2FQ969M7 185 aa8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 MOAP1Q96BY2 351 aa8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 GABARAPL1Q9H0R8 117 aa8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 SEMA6CQ9H3T2 930 aa8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 AMBNQ9NP70 447 aa8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 KLHL28Q9NXS3 571 aa8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 SH3BGRL2Q9UJC5 107 aa8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 NDRG4Q9ULP0 352 aaKnown RBP8.31□□□□□ -1.08
MTHFD1-201ENST00000216605 NUPL2O15504 423 aaKnown RBP8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 FRS3O43559 492 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 ALPPP05187 535 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 H1F0P07305 194 aaKnown RBP8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 SPNP16150 400 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 BCKDHBP21953 392 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 SOX6P35712 828 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 TGFBR1P36897 503 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 TGFBR2P37173 567 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 FRKP42685 505 aaPredicted RBP8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 RNF144AP50876 292 aaPredicted RBP8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 ERV3-1Q14264 604 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 SMN1Q16637 294 aaKnown RBP8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 USP53Q70EK8 1073 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 HDDC2Q7Z4H3 204 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 NKAIN3Q8N8D7 197 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 OR7G2Q8NG99 324 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 BBS10Q8TAM1 723 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 FAM174AQ8TBP5 190 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 ST8SIA2Q92186 375 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 MYDGFQ969H8 173 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 PEX11GQ96HA9 241 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 ZNF354BQ96LW1 612 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 NIPSNAP1Q9BPW8 284 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 COPS4Q9BT78 406 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 PRO3102Q9H379 93 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 PCDHGB6Q9Y5F9 930 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 CSNK1G3Q9Y6M4 447 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 DUXAA6NLW8 204 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 HCRTR1O43613 425 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 SEMG1P04279 462 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 CHRM4P08173 479 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 NME1P15531 152 aaKnown RBP8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 HOXA6P31267 233 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 LIPAP38571 399 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 KCNJ5P48544 419 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 HOXA1P49639 335 aaPredicted RBP8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 GALEQ14376 348 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 NDUFA9Q16795 377 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 TIGD6Q17RP2 521 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 TRMT12Q53H54 448 aaKnown RBP8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 SLC16A11Q8NCK7 471 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 OR52N1Q8NH53 320 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 GPR151Q8TDV0 419 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 CDS1Q92903 461 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 MMABQ96EY8 250 aaPredicted RBP8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 ACTRT3Q9BYD9 372 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 SLC6A15Q9H2J7 730 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 NMNAT1Q9HAN9 279 aaPredicted RBP8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 IFT46Q9NQC8 304 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 TMEM74BQ9NUR3 256 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 GLTPQ9NZD2 209 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 PILRAQ9UKJ1 303 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 CES1P1Q9UKY3 287 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 POMT2Q9UKY4 750 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 POFUT2Q9Y2G5 429 aa8.3□□□□□ -1.08
MTHFD1-201ENST00000216605 A0A0G2JMP0 313 aa8.29□□□□□ -1.08
MTHFD1-201ENST00000216605 PRAMEF25A6NGN4 478 aa8.29□□□□□ -1.08
MTHFD1-201ENST00000216605 DBX1A6NMT0 343 aa8.29□□□□□ -1.08
MTHFD1-201ENST00000216605 BCAT2O15382 392 aaPredicted RBP8.29□□□□□ -1.08
MTHFD1-201ENST00000216605 FGF17O60258 216 aa8.29□□□□□ -1.08
MTHFD1-201ENST00000216605 GMDSO60547 372 aa8.29□□□□□ -1.08
MTHFD1-201ENST00000216605 SOX14O95416 240 aa8.29□□□□□ -1.08
MTHFD1-201ENST00000216605 CTSBP07858 339 aa8.29□□□□□ -1.08
MTHFD1-201ENST00000216605 CPMP14384 443 aa8.29□□□□□ -1.08
MTHFD1-201ENST00000216605 TNNI3P19429 210 aa8.29□□□□□ -1.08
MTHFD1-201ENST00000216605 UQCRC1P31930 480 aa8.29□□□□□ -1.08
MTHFD1-201ENST00000216605 XCR1P46094 333 aa8.29□□□□□ -1.08
MTHFD1-201ENST00000216605 GFERP55789 205 aa8.29□□□□□ -1.08
MTHFD1-201ENST00000216605 TAS2R41P59536 307 aa8.29□□□□□ -1.08
MTHFD1-201ENST00000216605 SKP1P63208 163 aa8.29□□□□□ -1.08
MTHFD1-201ENST00000216605 ALDH6A1Q02252 535 aaKnown RBP8.29□□□□□ -1.08
MTHFD1-201ENST00000216605 PUM1Q14671 1186 aaKnown RBP eCLIP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms