RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 ALG1L2C9J202 215 aa13.46□□□□□ -0.25
UPK3A-201ENST00000216211 C16orf97H3BN30 126 aa13.46□□□□□ -0.25
UPK3A-201ENST00000216211 LSM1O15116 133 aaKnown RBP13.46□□□□□ -0.25
UPK3A-201ENST00000216211 ITM2AO43736 263 aa13.46□□□□□ -0.25
UPK3A-201ENST00000216211 KCNK2O95069 426 aa13.46□□□□□ -0.25
UPK3A-201ENST00000216211 OPN1LWP04000 364 aa13.46□□□□□ -0.25
UPK3A-201ENST00000216211 FRKP42685 505 aaPredicted RBP13.46□□□□□ -0.25
UPK3A-201ENST00000216211 EIF1AXP47813 144 aaKnown RBP13.46□□□□□ -0.25
UPK3A-201ENST00000216211 PCYT1AP49585 367 aa13.46□□□□□ -0.25
UPK3A-201ENST00000216211 PDE7AQ13946 482 aa13.46□□□□□ -0.25
UPK3A-201ENST00000216211 DUSP5Q16690 384 aa13.46□□□□□ -0.25
UPK3A-201ENST00000216211 RNF165Q6ZSG1 346 aa13.46□□□□□ -0.25
UPK3A-201ENST00000216211 CCDC121Q6ZUS5 278 aa13.46□□□□□ -0.25
UPK3A-201ENST00000216211 C22orf34Q6ZV56 151 aa13.46□□□□□ -0.25
UPK3A-201ENST00000216211 FAM214BQ7L5A3 538 aa13.46□□□□□ -0.25
UPK3A-201ENST00000216211 FAM110BQ8TC76 370 aa13.46□□□□□ -0.25
UPK3A-201ENST00000216211 C16orf58Q96GQ5 468 aa13.46□□□□□ -0.25
UPK3A-201ENST00000216211 MS4A4EQ96PG1 132 aa13.46□□□□□ -0.25
UPK3A-201ENST00000216211 SORT1Q99523 831 aa13.46□□□□□ -0.25
UPK3A-201ENST00000216211 PRRG4Q9BZD6 226 aa13.46□□□□□ -0.25
UPK3A-201ENST00000216211 KLHL4Q9C0H6 718 aa13.46□□□□□ -0.25
UPK3A-201ENST00000216211 UBTD1Q9HAC8 227 aa13.46□□□□□ -0.25
UPK3A-201ENST00000216211 NTMQ9P121 344 aa13.46□□□□□ -0.25
UPK3A-201ENST00000216211 CLEC4AQ9UMR7 237 aa13.46□□□□□ -0.25
UPK3A-201ENST00000216211 NPHS1O60500 1241 aa13.45□□□□□ -0.26
UPK3A-201ENST00000216211 DCTN3O75935 186 aa13.45□□□□□ -0.26
UPK3A-201ENST00000216211 SNUPNO95149 360 aaKnown RBP13.45□□□□□ -0.26
UPK3A-201ENST00000216211 CHEK2O96017 543 aa13.45□□□□□ -0.26
UPK3A-201ENST00000216211 CHRNGP07510 517 aa13.45□□□□□ -0.26
UPK3A-201ENST00000216211 ALOX5P09917 674 aa13.45□□□□□ -0.26
UPK3A-201ENST00000216211 FCGR2AP12318 317 aa13.45□□□□□ -0.26
UPK3A-201ENST00000216211 ZNF17P17021 662 aa13.45□□□□□ -0.26
UPK3A-201ENST00000216211 TBXA2RP21731 343 aa13.45□□□□□ -0.26
UPK3A-201ENST00000216211 SERPINB5P36952 375 aa13.45□□□□□ -0.26
UPK3A-201ENST00000216211 SLC6A8P48029 635 aa13.45□□□□□ -0.26
UPK3A-201ENST00000216211 ARFIP2P53365 341 aa13.45□□□□□ -0.26
UPK3A-201ENST00000216211 FGFBP1Q14512 234 aa13.45□□□□□ -0.26
UPK3A-201ENST00000216211 EXOC3L2Q2M3D2 409 aa13.45□□□□□ -0.26
UPK3A-201ENST00000216211 CCNJQ5T5M9 372 aa13.45□□□□□ -0.26
UPK3A-201ENST00000216211 ANKRD34AQ69YU3 496 aa13.45□□□□□ -0.26
UPK3A-201ENST00000216211 MFSD12Q6NUT3 480 aa13.45□□□□□ -0.26
UPK3A-201ENST00000216211 Q71RC1 249 aaPredicted RBP13.45□□□□□ -0.26
UPK3A-201ENST00000216211 BIVMQ86UB2 503 aa13.45□□□□□ -0.26
UPK3A-201ENST00000216211 DDIASQ8IXT1 998 aa13.45□□□□□ -0.26
UPK3A-201ENST00000216211 OR10D3Q8NH80 312 aa13.45□□□□□ -0.26
UPK3A-201ENST00000216211 PIWIL2Q8TC59 973 aaKnown RBP13.45□□□□□ -0.26
UPK3A-201ENST00000216211 THOC1Q96FV9 657 aaKnown RBP13.45□□□□□ -0.26
UPK3A-201ENST00000216211 SH3YL1Q96HL8 342 aaPredicted RBP13.45□□□□□ -0.26
UPK3A-201ENST00000216211 C18orf12Q96KH6 178 aa13.45□□□□□ -0.26
UPK3A-201ENST00000216211 KLHDC3Q9BQ90 382 aa13.45□□□□□ -0.26
UPK3A-201ENST00000216211 ACSS1Q9NUB1 689 aaPredicted RBP13.45□□□□□ -0.26
UPK3A-201ENST00000216211 STOML1Q9UBI4 398 aa13.45□□□□□ -0.26
UPK3A-201ENST00000216211 GIMAP2Q9UG22 337 aa13.45□□□□□ -0.26
UPK3A-201ENST00000216211 TMED5Q9Y3A6 229 aa13.45□□□□□ -0.26
UPK3A-201ENST00000216211 A0A087WZY1 265 aa13.44□□□□□ -0.26
UPK3A-201ENST00000216211 A0A1W2PRB8 838 aa13.44□□□□□ -0.26
UPK3A-201ENST00000216211 PIP5K1BO14986 540 aa13.44□□□□□ -0.26
UPK3A-201ENST00000216211 SMPD2O60906 423 aa13.44□□□□□ -0.26
UPK3A-201ENST00000216211 LYPLA1O75608 230 aaPredicted RBP13.44□□□□□ -0.26
UPK3A-201ENST00000216211 PLGP00747 810 aaPredicted RBP13.44□□□□□ -0.26
UPK3A-201ENST00000216211 NGFRP08138 427 aa13.44□□□□□ -0.26
UPK3A-201ENST00000216211 BCKDHAP12694 445 aa13.44□□□□□ -0.26
UPK3A-201ENST00000216211 ADSLP30566 484 aaPredicted RBP13.44□□□□□ -0.26
UPK3A-201ENST00000216211 ARRB2P32121 409 aa13.44□□□□□ -0.26
UPK3A-201ENST00000216211 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.44□□□□□ -0.26
UPK3A-201ENST00000216211 PLPPR5Q32ZL2 321 aa13.44□□□□□ -0.26
UPK3A-201ENST00000216211 UGT3A2Q3SY77 523 aa13.44□□□□□ -0.26
UPK3A-201ENST00000216211 SHEQ5VZ18 495 aa13.44□□□□□ -0.26
UPK3A-201ENST00000216211 WDR75Q8IWA0 830 aaKnown RBP13.44□□□□□ -0.26
UPK3A-201ENST00000216211 GTPBP8Q8N3Z3 284 aaPredicted RBP13.44□□□□□ -0.26
UPK3A-201ENST00000216211 COX18Q8N8Q8 333 aa13.44□□□□□ -0.26
UPK3A-201ENST00000216211 TWIST2Q8WVJ9 160 aa13.44□□□□□ -0.26
UPK3A-201ENST00000216211 JADE3Q92613 823 aa13.44□□□□□ -0.26
UPK3A-201ENST00000216211 FAM120BQ96EK7 910 aaKnown RBP13.44□□□□□ -0.26
UPK3A-201ENST00000216211 ADGRG7Q96K78 797 aa13.44□□□□□ -0.26
UPK3A-201ENST00000216211 MARK4Q96L34 752 aa13.44□□□□□ -0.26
UPK3A-201ENST00000216211 RNF145Q96MT1 663 aa13.44□□□□□ -0.26
UPK3A-201ENST00000216211 HS3ST6Q96QI5 342 aa13.44□□□□□ -0.26
UPK3A-201ENST00000216211 TRMOQ9BU70 441 aa13.44□□□□□ -0.26
UPK3A-201ENST00000216211 TMEM120AQ9BXJ8 343 aa13.44□□□□□ -0.26
UPK3A-201ENST00000216211 SIRT3Q9NTG7 399 aaPredicted RBP13.44□□□□□ -0.26
UPK3A-201ENST00000216211 MED17Q9NVC6 651 aa13.44□□□□□ -0.26
UPK3A-201ENST00000216211 HAO1Q9UJM8 370 aa13.44□□□□□ -0.26
UPK3A-201ENST00000216211 DCTN4Q9UJW0 460 aa13.44□□□□□ -0.26
UPK3A-201ENST00000216211 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.44□□□□□ -0.26
UPK3A-201ENST00000216211 EMC9Q9Y3B6 208 aa13.44□□□□□ -0.26
UPK3A-201ENST00000216211 ARID1AO14497 2285 aa13.44□□□□□ -0.26
UPK3A-201ENST00000216211 A0A0G2JND7 137 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 TNFSF11O14788 317 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 CXCL13O43927 109 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 HSPA4LO95757 839 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 INHBBP09529 407 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 HPGDP15428 266 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 LOXP28300 417 aaPredicted RBP13.43□□□□□ -0.26
UPK3A-201ENST00000216211 ASMTP46597 345 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 ZNF41P51814 821 aaPredicted RBP13.43□□□□□ -0.26
UPK3A-201ENST00000216211 CTBP2P56545 445 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 RAC1P63000 192 aa13.43□□□□□ -0.26
UPK3A-201ENST00000216211 POU6F2P78424 691 aaPredicted RBP13.43□□□□□ -0.26
UPK3A-201ENST00000216211 CD226Q15762 336 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms