RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Fgf20Q9ESL9 211 aa9.18□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Trim3Q9R1R2 744 aa9.18□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Zfp433A0A0J9YUD4 600 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Gm32687A0A1W2P6H7 600 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Cd300cA2A7V7 229 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Gm595A2AF73 655 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Cd101A8E0Y8 1033 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Zfp97E9PZP6 546 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Vmn2r109K7N747 858 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Zfp960L7N267 546 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Dscr3O35075 297 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 P04214 136 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Tcea3P23881 347 aaKnown RBP9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Stfa2P35174 103 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Tmem248Q3TBN1 314 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Rnf223Q3UV31 285 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Pydc3Q3V3Q4 588 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Snx33Q4VAA7 574 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 LpoQ5SW46 710 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Prg2Q61878 223 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 ShbQ6PD21 503 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 CebpeQ6PZD9 281 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Pum1Q80U78 1189 aaKnown RBP9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Serpina3fQ80X76 445 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Zfp763Q8BIC7 588 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Gpr152Q8BXS7 511 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Slc5a8Q8BYF6 611 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Tgif2Q8C0Y1 237 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 ZxdcQ8C8V1 858 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 H2afy2Q8CCK0 372 aaKnown RBP9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr1232Q8VEX7 311 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 TipinQ91WA1 278 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 SostQ99P68 211 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Spns3Q9D232 514 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Elovl4Q9EQC4 312 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Gm8251F6VUT6 1994 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Heatr5bQ8C547 2070 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Lilra6A0A0B4J1F3 663 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 TrdcA0A0G2JEU3 153 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr485A0A140LJF5 317 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Slc9a6A1L3P4 702 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Slc25a34A2ADF7 318 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Mthfd2lD3YZG8 338 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr746E9Q840 314 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Scarb2O35114 478 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Thbs2Q03350 1172 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Il10raQ61727 575 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Smad2Q62432 467 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Slc22a13Q6A4L0 551 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr1080Q7TR67 313 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 PeloQ80X73 385 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Lrrtm4Q80XG9 590 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Spag1Q80ZX8 901 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Znf592Q8BHZ4 1262 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Slc22a29Q8BWG6 551 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Dock8Q8C147 2100 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Osgin1Q8VC10 478 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr61Q8VGM2 311 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Pcdhga12Q91XY7 932 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Cd209dQ91ZW8 237 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Acox3Q9EPL9 700 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Tor3aQ9ER38 385 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Tas2r103Q9JKA3 312 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Cyp2d22Q9JKY7 500 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Aldh9a1Q9JLJ2 494 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Dkk3Q9QUN9 349 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 TapbpQ9R233 465 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 RfxankQ9Z205 269 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 9930021J03RikH3BKP8 2027 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Tcrg-V3A0A0G2JEW2 117 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Rnf39A2RT81 352 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 TmppeD3Z286 447 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 PdynO35417 248 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 OtcP11725 354 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 P18533 117 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 VipP32648 170 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Rps7P62082 194 aaKnown RBP9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Nkx3-2P97503 333 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Prss57Q14B24 284 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Itpripl2Q3UV16 535 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Sema3bQ62177 748 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Dtx4Q6PDK8 616 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Fgl1Q71KU9 314 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr298Q7TS06 332 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Leng9Q8BTN6 485 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Mchr1Q8JZL2 353 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Chrna3Q8R4G9 499 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Grk5Q8VEB1 590 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr692Q8VF03 329 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Asb18Q8VHA6 467 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 4931417E11RikQ9CR05 305 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Med18Q9CZ82 208 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Exo1Q9QZ11 837 aa9.17□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Cd209fD3Z1H5 274 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Chst13D3Z6E3 336 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr723E9PZU2 309 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr172E9Q8F6 309 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Ccl26F8VQM2 93 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 S100a2J3QMC7 104 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr724K7N5X7 309 aa9.16□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms