RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Cx3cl1O35188 395 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 ClppO88696 272 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 P06336 421 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Cd14P10810 366 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Rrm2P11157 390 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Gadd45aP48316 165 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Ccr4P51680 360 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Uck1P52623 277 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Zfp41Q02526 198 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Mfsd12Q3U481 476 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Slc25a23Q6GQS1 467 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Prrg3Q6PAQ9 231 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Ppp2r2bQ6ZWR4 443 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Ffar1Q76JU9 300 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Flrt2Q8BLU0 660 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Gucd1Q8BZI6 239 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Wdr89Q9D0R9 386 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Cthrc1Q9D1D6 245 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 CutalQ9D1U5 156 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Acad8Q9D7B6 413 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Hmgn3Q9DCB1 99 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Ca7Q9ERQ8 264 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Ndufa13Q9ERS2 144 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 HcstQ9QUJ0 79 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Mid2Q9QUS6 705 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 RhagQ9QUT0 438 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Ulk2Q9QY01 1037 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 CtsjQ9R014 334 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Usp18Q9WTV6 368 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Nckap5E9QAE1 1909 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Olfr625-ps1A0A140T8L4 321 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Spin2-ps6A0A140T8V2 174 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Galntl6E5D8G1 601 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Erich2E9Q1A6 463 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Prdx4O08807 274 aaKnown RBP8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Fkbp8O35465 402 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Asna1O54984 348 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 MndaP0DOV1 425 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Ggta1P23336 394 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Rpl5P47962 297 aaKnown RBP8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Gnb5P62881 395 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 RykQ01887 594 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Sox14Q04892 240 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Cobll1Q3UMF0 1273 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Pydc3Q3V3Q4 588 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Znf488Q5HZG9 337 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Tnfaip3Q60769 775 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 S100a15aQ6S5I3 108 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Timd4Q6U7R4 343 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Olfr774Q7TRI5 312 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Acsm4Q80W40 580 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Cst13Q80ZN5 141 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Slc35d3Q8BGF8 422 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Fam210aQ8BGY7 273 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 LssQ8BLN5 733 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Prpf18Q8BM39 342 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 PigzQ8BTP0 560 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Olfr510Q8VEW6 314 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Olfr812Q8VG64 310 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Znf639Q99KZ6 485 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Eif2b1Q99LC8 305 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 DenrQ9CQJ6 198 aaKnown RBP8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Batf3Q9D275 118 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Tmeff2Q9QYM9 374 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Sult2a6B2RVI8 285 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Wdr25E9Q349 535 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 NsmafO35242 920 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Sult2b1O35400 338 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Msx1P13297 303 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Rab17P35292 214 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Dlx2P40764 332 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 MatkP41242 505 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Epb41P48193 858 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 AhrrQ3U1U7 701 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Lsg1Q3UM18 644 aaKnown RBP8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Syce1lQ5D525 247 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Slc5a6Q5U4D8 634 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Olfr146Q60884 306 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Olfr295Q7TS08 309 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Nipal3Q8BGN5 410 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Q8BPC6 396 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Dusp28Q8BTR5 163 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Mrgpra5Q91ZC7 304 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Slc35a5Q921R7 437 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Q9CPZ3 230 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 4930553M12RikQ9CUH1 165 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Phf6Q9D4J7 364 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Slc25a18Q9DB41 320 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Olfr44Q9EQB8 314 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 SrfQ9JM73 504 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Prl3c1Q9QUN5 212 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Foxo1Q9R1E0 652 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Gm14418A2ARR6 358 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Gm14322A2AW66 358 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Usp36B1AQJ2 1098 aaKnown RBP8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Slc22a28B2RT89 552 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Vmn1r77E9PY60 306 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Hsd17b10O08756 261 aaKnown RBP8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 Wisp1O54775 367 aa8.06□□□□□ -1.12
Trim39-201ENSMUST00000042717 P01657 111 aa8.06□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 52.1 ms