RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 5430402E10RikQ9D3N5 173 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Arfgap1Q9EPJ9 414 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Dclre1aQ9JIC3 1026 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 NmuQ9QXK8 174 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Ubr3Q5U430 1889 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Zfp534A2A7A1 661 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr1303A2AVW1 312 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Zfp992B1ASD8 573 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Tomm5B1AXP6 51 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Zfp282E9PVC2 666 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gm21915J3QPM7 133 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Tmem14aP56983 99 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Fgf13P70377 245 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Scgb1a1Q06318 96 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Ccbe1Q3MI99 408 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr1463Q7TQR3 310 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Enpp6Q8BGN3 440 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Itih5Q8BJD1 952 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Zfp991Q8R1N3 573 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr791Q8VGJ0 312 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr676Q8VGZ9 317 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Spns3Q9D232 514 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 RgccQ9DBX1 137 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 ArntlQ9WTL8 632 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gm6710A2ART0 554 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Lcn11A2BHR2 178 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gm8888J3QPX5 126 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr1513L7N457 313 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 RabggtbP53612 339 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Tfb2mQ3TL26 396 aaKnown RBP9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Osbp2Q5QNQ6 908 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Slc6a5Q761V0 799 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 H1fntQ8CJI4 398 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Mrpl38Q8K2M0 380 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Dcp1aQ91YD3 602 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Brinp1Q920P3 760 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Pycr1Q922W5 309 aa9.71□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Cacna1cQ01815 2139 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 D3Ertd254eA0A0G2JEM5 796 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr1034A0A1L1ST14 310 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tmem233D3Z1U7 110 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gm7233E9PZI8 198 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gm9732F6QVC4 198 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gm8104K7N744 198 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 FxnO35943 207 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Papss2O88428 621 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Mc3rP33033 323 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 SctQ08535 133 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 MuskQ61006 868 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Smad2Q62432 467 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 P4ha3Q6W3F0 542 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tas2r39Q7TQA5 319 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Rab9bQ8BHH2 201 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Fbxw17Q8CFE8 466 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Zbtb20Q8K0L9 741 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gpr18Q8K1Z6 331 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 C8gQ8VCG4 202 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tmem5Q8VDX6 444 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Taar1Q923Y8 332 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 AassQ99K67 926 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 NaaaQ9D7V9 362 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Cpn2Q9DBB9 547 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tmem43Q9DBS1 400 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tm9sf3Q9ET30 587 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Bin3Q9JI08 253 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Dbf4Q9QZ41 663 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Spint1Q9R097 507 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 P04214 136 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Ntrk2P15209 821 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Sec1P97353 368 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 P2rx3Q3UR32 397 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tgfbr2Q62312 592 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Snrnp70Q62376 448 aaKnown RBP9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tas2r135Q7TQA9 312 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tas2r40Q7TQB8 319 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr1094Q8VF13 330 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Acss1Q99NB1 682 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Art4Q9CRA0 300 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Exosc5Q9CRA8 235 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Ppp1r35Q9D8C8 260 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Smim23Q9DAL0 136 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Q9DAR0 182 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Clec1bQ9JL99 229 aa9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Ilf3Q9Z1X4 898 aaKnown RBP9.71□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tcrg-V3A0A0G2JEW2 117 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr1432A0A140LHS7 346 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Cd300ld4A2A7W1 245 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Rhox1B1APN4 224 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Sh3yl1O08641 340 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Arg2O08691 354 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 CckbrP56481 453 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Slc30a2Q2HJ10 371 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Pdss2Q33DR3 401 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Fbxo31Q3TQF0 507 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 McidasQ3UZ45 379 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Usp22Q5DU02 525 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Slc35g3Q5F297 340 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Clec4a4Q5YIR8 236 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Sntb2Q61235 520 aa9.7□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Acvr1bQ61271 505 aa9.7□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms