RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Hoxd4P10628 250 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Entpd6Q3U0P5 455 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Mccc2Q3ULD5 563 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Tspan10Q8VCF5 331 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr394Q8VGR5 310 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr380Q8VGT3 311 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Oas3Q8VI93 1138 aaKnown RBP9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Cldnd2Q9D9H2 167 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Fabp7P51880 132 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 PtnP63089 168 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Tubg1P83887 451 aaKnown RBP9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 N6amt1Q6SKR2 214 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Sh3rf2Q8BZT2 735 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Calhm4Q8CE93 315 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Plekhh3Q8VCE9 796 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Recql5Q8VID5 982 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Park7Q99LX0 189 aaKnown RBP9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Cpne6Q9Z140 557 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Lrp6O88572 1613 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Ceacam3E9Q6J4 706 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Dok2O70469 412 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Csn1s2bP02664 143 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Cyp21P03940 487 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 SrcP05480 541 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Polr2iP60898 125 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Epha1Q60750 977 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Tusc1Q673H1 205 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Tmem164Q6PHN7 296 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Hmgcll1Q8JZS7 343 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Gpat4Q8K2C8 456 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Znf668Q8K2R5 619 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 DhrsxQ8VBZ0 335 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr518Q8VEW1 333 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 WacQ924H7 646 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 BniplQ99JU7 328 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Arfgap3Q9D8S3 523 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 PmpcaQ9DC61 524 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Pard6gQ9JK84 382 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Fkbp8O35465 402 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Tmem18Q3TUD9 140 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Avl9Q80U56 649 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 QpctlQ8BH73 383 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 PhyhipQ8K0S0 330 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Fn3krpQ8K274 309 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Q9D1K7 174 aaKnown RBP9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Hyal6Q9D4E9 494 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Cypt12Q9DAR6 119 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Zfp616J3QN14 987 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Syt3O35681 587 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Fbxo7Q3U7U3 523 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Cys1Q8R4T1 145 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Lipt1Q8VCM4 373 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr820Q8VFU5 312 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Mrgpra5Q91ZC7 304 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Nek7Q9ES74 302 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Pkmyt1Q9ESG9 490 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Slc37a4A0A1L1SUI3 450 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 CatsperbA2RTF1 1109 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Vmn2r9K7N6Z8 848 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Prrt1O35449 306 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Cxcr4P70658 359 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Nkx3-2P97503 333 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Tmprss11cQ1JRP2 431 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Thoc6Q5U4D9 341 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Kiss1Q6Y4S4 130 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Prr14Q7TPN9 612 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Rab43Q8CG50 210 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Pomt1Q8R2R1 746 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Moxd1Q9CXI3 613 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Asf1bQ9DAP7 202 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Ropn1lQ9EQ00 218 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Elp4Q9ER73 422 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Cacng4Q9JJV4 327 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 TfecQ9WTW4 317 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Col5a2Q3U962 1497 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 4930467E23RikD3Z1P8 350 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Gm15319E9Q637 350 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Vmn2r97K7N6Z2 861 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Cldn4O35054 210 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Pim1P06803 397 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Dlx2P40764 332 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Prr27Q3SYJ2 352 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Stox2Q499E5 926 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 GalpQ810H5 117 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Gm21119Q8C646 350 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Gabarapl1Q8R3R8 117 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Yif1bQ9CX30 311 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Mgat4dQ9D4R2 373 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Ms4a4bQ9ES61 226 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 A0A286YCQ8 80 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Vmn1r94K7N6X3 305 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Pbx2O35984 430 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Hsf1P38532 525 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Zfp41Q02526 198 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr629Q0VBH3 314 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 H2-M2Q6W9L1 343 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Prss43Q76HL1 382 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 GnsQ8BFR4 544 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Slc30a8Q8BGG0 367 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Gpr107Q8BUV8 551 aa9.6□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 84 ms