RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 CYBRD1Q53TN4 286 aa11.89□□□□□ -0.51
PHGDH-218ENST00000641491 ZNF766Q5HY98 468 aa11.89□□□□□ -0.51
PHGDH-218ENST00000641491 EXOSC6Q5RKV6 272 aaKnown RBP11.89□□□□□ -0.51
PHGDH-218ENST00000641491 SLC25A25Q6KCM7 469 aa11.89□□□□□ -0.51
PHGDH-218ENST00000641491 CYP2R1Q6VVX0 501 aa11.89□□□□□ -0.51
PHGDH-218ENST00000641491 ASB18Q6ZVZ8 466 aa11.89□□□□□ -0.51
PHGDH-218ENST00000641491 ASRGL1Q7L266 308 aa11.89□□□□□ -0.51
PHGDH-218ENST00000641491 ZNF550Q7Z398 422 aa11.89□□□□□ -0.51
PHGDH-218ENST00000641491 CYP4Z1Q86W10 505 aa11.89□□□□□ -0.51
PHGDH-218ENST00000641491 GATSQ8NAP1 163 aa11.89□□□□□ -0.51
PHGDH-218ENST00000641491 SMYD1Q8NB12 490 aa11.89□□□□□ -0.51
PHGDH-218ENST00000641491 TOR1AIP2Q8NFQ8 470 aa11.89□□□□□ -0.51
PHGDH-218ENST00000641491 SNRNP27Q8WVK2 155 aaKnown RBP11.89□□□□□ -0.51
PHGDH-218ENST00000641491 HAS2Q92819 552 aa11.89□□□□□ -0.51
PHGDH-218ENST00000641491 PCDHAC1Q9H158 963 aa11.89□□□□□ -0.51
PHGDH-218ENST00000641491 RPS6KB2Q9UBS0 482 aa11.89□□□□□ -0.51
PHGDH-218ENST00000641491 CD300AQ9UGN4 299 aa11.89□□□□□ -0.51
PHGDH-218ENST00000641491 TUBD1Q9UJT1 453 aa11.89□□□□□ -0.51
PHGDH-218ENST00000641491 FAM32AQ9Y421 112 aaKnown RBP11.89□□□□□ -0.51
PHGDH-218ENST00000641491 WIF1Q9Y5W5 379 aa11.89□□□□□ -0.51
PHGDH-218ENST00000641491 V9GYQ6 96 aa11.89□□□□□ -0.51
PHGDH-218ENST00000641491 COL6A6A6NMZ7 2263 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 AGAP5A6NIR3 686 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 ALG1L2C9J202 215 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 AP3D1O14617 1153 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 UGT2B17O75795 530 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 ANGPTL1O95841 491 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 IGKV1D-16P01601 117 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 UBTFL6P0CB48 400 aaPredicted RBP11.88□□□□□ -0.51
PHGDH-218ENST00000641491 ELAVL4P26378 380 aaKnown RBP11.88□□□□□ -0.51
PHGDH-218ENST00000641491 SLC6A8P48029 635 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 ST13P50502 369 aaKnown RBP11.88□□□□□ -0.51
PHGDH-218ENST00000641491 GZMMP51124 257 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 RGS8P57771 180 aaPredicted RBP11.88□□□□□ -0.51
PHGDH-218ENST00000641491 KCNJ10P78508 379 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 CBFBQ13951 182 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 ZNF141Q15928 474 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 SPINK14Q6IE38 97 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 CCDC80Q76M96 950 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 HMGN2P46Q86SG4 172 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 MARCH3Q86UD3 253 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 PTRH1Q86Y79 214 aaKnown RBP11.88□□□□□ -0.51
PHGDH-218ENST00000641491 SPPL2CQ8IUH8 684 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 C10orf111Q8N326 155 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 OR1J4Q8NGS1 313 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 ZNF563Q8TA94 476 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 RNF217Q8TC41 542 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 PAQR8Q8TEZ7 354 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 GEMIN6Q8WXD5 167 aaKnown RBP11.88□□□□□ -0.51
PHGDH-218ENST00000641491 HGDQ93099 445 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 SH3YL1Q96HL8 342 aaPredicted RBP11.88□□□□□ -0.51
PHGDH-218ENST00000641491 FAM173AQ9BQD7 235 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 SAP130Q9H0E3 1048 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 QRSL1Q9H0R6 528 aaKnown RBP11.88□□□□□ -0.51
PHGDH-218ENST00000641491 RUBCNLQ9H714 662 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 GORASP2Q9H8Y8 452 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 DKKL1Q9UK85 242 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 USP22Q9UPT9 525 aa11.88□□□□□ -0.51
PHGDH-218ENST00000641491 GPC6Q9Y625 555 aaPredicted RBP11.88□□□□□ -0.51
PHGDH-218ENST00000641491 CFAP46Q8IYW2 2715 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 ZNF264O43296 627 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 GMFGO60234 142 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 EIF4E2O60573 245 aaKnown RBP11.87□□□□□ -0.51
PHGDH-218ENST00000641491 IFNW1P05000 195 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 SP1P08047 785 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 CCL3P10147 92 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 ITGA2P17301 1181 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 CNR1P21554 472 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 MSX1P28360 303 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 CASP3P42574 277 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 TNFSF10P50591 281 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 RNF144AP50876 292 aaPredicted RBP11.87□□□□□ -0.51
PHGDH-218ENST00000641491 CHRNB3Q05901 458 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 FGFBP1Q14512 234 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 ZNF169Q14929 603 aaPredicted RBP11.87□□□□□ -0.51
PHGDH-218ENST00000641491 IFI44LQ53G44 452 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 MRPL2Q5T653 305 aaKnown RBP11.87□□□□□ -0.51
PHGDH-218ENST00000641491 RNF220Q5VTB9 566 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 LCN8Q6JVE9 175 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 DHRS4L2Q6PKH6 230 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 ZNF836Q6ZNA1 936 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 OLIG3Q7RTU3 272 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 VRK2Q86Y07 508 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 AMER2Q8N7J2 671 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 TEX19Q8NA77 164 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 OR4C3Q8NH37 302 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 B4GALNT2Q8NHY0 566 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 SLC47A1Q96FL8 570 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 ABHD17AQ96GS6 310 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 HSH2DQ96JZ2 352 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 NODALQ96S42 347 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 FBXO34Q9NWN3 711 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 SLC7A8Q9UHI5 535 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 AURKCQ9UQB9 309 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 POMPQ9Y244 141 aa11.87□□□□□ -0.51
PHGDH-218ENST00000641491 CHCHD2Q9Y6H1 151 aaPredicted RBP11.87□□□□□ -0.51
PHGDH-218ENST00000641491 DSPPQ9NZW4 1301 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 CCDC88CQ9P219 2028 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 ANKRD33BA6NCL7 494 aa11.86□□□□□ -0.51
PHGDH-218ENST00000641491 AQP12BA6NM10 295 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms