RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 TP53I3Q53FA7 332 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 XKRXQ6PP77 449 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 P4HA3Q7Z4N8 544 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 NLGN4XQ8N0W4 816 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 ZBTB8BQ8NAP8 495 aaPredicted RBP16.46■□□□□ 0.23
SCARB2-223ENST00000640640 OR8S1Q8NH09 359 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 RPL3LQ92901 407 aaKnown RBP16.46■□□□□ 0.23
SCARB2-223ENST00000640640 ATXN7L1Q9ULK2 861 aaPredicted RBP16.46■□□□□ 0.23
SCARB2-223ENST00000640640 ANKRD31Q8N7Z5 1873 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 FXYD6-FXYD2A0A087WZ82 144 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 PTTG1O95997 202 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 RLN2P04090 185 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 LTB4RQ15722 352 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 CARD17Q5XLA6 110 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 TMEM163Q8TC26 289 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 SCGB3A2Q96PL1 93 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 FXYD6Q9H0Q3 95 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 CARD8Q9Y2G2 431 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 HBQ1P09105 142 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 UCHL1P09936 223 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 PIGAP37287 484 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 SLC6A8P48029 635 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 GDI2P50395 445 aaKnown RBP16.46■□□□□ 0.23
SCARB2-223ENST00000640640 ARHGDIBP52566 201 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 EMP2P54851 167 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 MFSD13AQ14CX5 517 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 SPCS2Q15005 226 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 SHHQ15465 462 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 PGBD2Q6P3X8 592 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 TBPL2Q6SJ96 375 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 ZNF431Q8TF32 576 aaPredicted RBP16.46■□□□□ 0.23
SCARB2-223ENST00000640640 PDXPQ96GD0 296 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 SRPK3Q9UPE1 567 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 PLEKHA6Q9Y2H5 1048 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 FOSL2P15408 326 aa16.46■□□□□ 0.22
SCARB2-223ENST00000640640 RBM34P42696 430 aaKnown RBP16.46■□□□□ 0.22
SCARB2-223ENST00000640640 GDPD1Q8N9F7 314 aa16.46■□□□□ 0.22
SCARB2-223ENST00000640640 SPRYD4Q8WW59 207 aaPredicted RBP16.46■□□□□ 0.22
SCARB2-223ENST00000640640 CREB3L1Q96BA8 519 aa16.46■□□□□ 0.22
SCARB2-223ENST00000640640 CPNE2Q96FN4 548 aaPredicted RBP16.46■□□□□ 0.22
SCARB2-223ENST00000640640 HHATLQ9HCP6 504 aa16.46■□□□□ 0.22
SCARB2-223ENST00000640640 FAIMQ9NVQ4 179 aa16.46■□□□□ 0.22
SCARB2-223ENST00000640640 SLC25A37Q9NYZ2 338 aa16.46■□□□□ 0.22
SCARB2-223ENST00000640640 NLKQ9UBE8 527 aa16.46■□□□□ 0.22
SCARB2-223ENST00000640640 TRAV27A0A087WT01 109 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 MAS1P04201 325 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 GYPBP06028 91 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 ACPPP15309 386 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 MAZP56270 477 aaKnown RBP16.45■□□□□ 0.22
SCARB2-223ENST00000640640 ATG5Q9H1Y0 275 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 TP63Q9H3D4 680 aaPredicted RBP16.45■□□□□ 0.22
SCARB2-223ENST00000640640 EGLN3Q9H6Z9 239 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 CPNE5Q9HCH3 593 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 SH2B3Q9UQQ2 575 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 MEMO1Q9Y316 297 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 BRWD1Q9NSI6 2320 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 C1QAP02745 245 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 BCL6P41182 706 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 NTRK2Q16620 822 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 CROCCQ5TZA2 2017 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 TECPR1Q7Z6L1 1165 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 CACNG6Q9BXT2 260 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 LDAHQ9H6V9 325 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 CBLCQ9ULV8 474 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 COL11A2P13942 1736 aaPredicted RBP16.45■□□□□ 0.22
SCARB2-223ENST00000640640 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.45■□□□□ 0.22
SCARB2-223ENST00000640640 PHYHO14832 338 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 OR2T1O43869 369 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 IFNA7P01567 189 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 GTF2F2P13984 249 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 KCNJ5P48544 419 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 E2F1Q01094 437 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 GPR19Q15760 415 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 DUSP6Q16828 381 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 SLC18B1Q6NT16 456 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 SLC48A1Q6P1K1 146 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 INO80EQ8NBZ0 244 aaPredicted RBP16.45■□□□□ 0.22
SCARB2-223ENST00000640640 OR13F1Q8NGS4 319 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 OR1E3Q8WZA6 343 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 MUL1Q969V5 352 aa16.45■□□□□ 0.22
SCARB2-223ENST00000640640 WASHC1A8K0Z3 465 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 B3GALT4O96024 378 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 ZNF84P51523 738 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 GALK2Q01415 458 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 WASH2PQ6VEQ5 465 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 OR5W2Q8NH69 310 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 CLDN24A6NM45 220 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 PKLRP30613 574 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 ERVK-25P63136 954 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 HSF5Q4G112 596 aaPredicted RBP16.44■□□□□ 0.22
SCARB2-223ENST00000640640 IL22RA1Q8N6P7 574 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 AKAP1Q92667 903 aaKnown RBP eCLIP16.44■□□□□ 0.226e-6■■□□□ 12.3
SCARB2-223ENST00000640640 KIAA1143Q96AT1 154 aaPredicted RBP16.44■□□□□ 0.22
SCARB2-223ENST00000640640 MCOLN1Q9GZU1 580 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 ZNF304Q9HCX3 659 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 UBQLN4Q9NRR5 601 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 TESQ9UGI8 421 aaKnown RBP16.44■□□□□ 0.22
SCARB2-223ENST00000640640 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 L7N2F9 121 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 AP1G1O43747 822 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms