RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 COX18Q8N8Q8 333 aa15.1■□□□□ 0.01
SMN2-216ENST00000638794 OR6Y1Q8NGX8 325 aa15.1■□□□□ 0.01
SMN2-216ENST00000638794 ACTRT2Q8TDY3 377 aa15.1■□□□□ 0.01
SMN2-216ENST00000638794 COX4I2Q96KJ9 171 aa15.1■□□□□ 0.01
SMN2-216ENST00000638794 RNF145Q96MT1 663 aa15.1■□□□□ 0.01
SMN2-216ENST00000638794 KLHDC3Q9BQ90 382 aa15.1■□□□□ 0.01
SMN2-216ENST00000638794 TRMOQ9BU70 441 aa15.1■□□□□ 0.01
SMN2-216ENST00000638794 TMEM185BQ9H7F4 350 aa15.1■□□□□ 0.01
SMN2-216ENST00000638794 PPCSQ9HAB8 311 aa15.1■□□□□ 0.01
SMN2-216ENST00000638794 HHATLQ9HCP6 504 aa15.1■□□□□ 0.01
SMN2-216ENST00000638794 PLSCR4Q9NRQ2 329 aa15.1■□□□□ 0.01
SMN2-216ENST00000638794 MCTS1Q9ULC4 181 aaKnown RBP15.1■□□□□ 0.01
SMN2-216ENST00000638794 TMED5Q9Y3A6 229 aa15.1■□□□□ 0.01
SMN2-216ENST00000638794 NUP214P35658 2090 aaPredicted RBP15.09■□□□□ 0.01
SMN2-216ENST00000638794 TMEM233B4DJY2 109 aa15.09■□□□□ 0.01
SMN2-216ENST00000638794 TNFSF11O14788 317 aa15.09■□□□□ 0.01
SMN2-216ENST00000638794 ADAMDEC1O15204 470 aa15.09■□□□□ 0.01
SMN2-216ENST00000638794 CXCL13O43927 109 aa15.09■□□□□ 0.01
SMN2-216ENST00000638794 TRIM13O60858 407 aa15.09■□□□□ 0.01
SMN2-216ENST00000638794 CHEK2O96017 543 aa15.09■□□□□ 0.01
SMN2-216ENST00000638794 HEXAP06865 529 aa15.09■□□□□ 0.01
SMN2-216ENST00000638794 ALOX5P09917 674 aa15.09■□□□□ 0.01
SMN2-216ENST00000638794 HPGDP15428 266 aa15.09■□□□□ 0.01
SMN2-216ENST00000638794 ZNF41P51814 821 aaPredicted RBP15.09■□□□□ 0.01
SMN2-216ENST00000638794 CTBP2P56545 445 aa15.09■□□□□ 0.01
SMN2-216ENST00000638794 RAC1P63000 192 aa15.09■□□□□ 0.01
SMN2-216ENST00000638794 CCNJQ5T5M9 372 aa15.09■□□□□ 0.01
SMN2-216ENST00000638794 CPTPQ5TA50 214 aa15.09■□□□□ 0.01
SMN2-216ENST00000638794 ZCCHC12Q6PEW1 402 aa15.09■□□□□ 0.01
SMN2-216ENST00000638794 STAC2Q6ZMT1 411 aa15.09■□□□□ 0.01
SMN2-216ENST00000638794 ESPNLQ6ZVH7 1005 aa15.09■□□□□ 0.01
SMN2-216ENST00000638794 CIARTQ8N365 385 aaPredicted RBP15.09■□□□□ 0.01
SMN2-216ENST00000638794 PPP1R14CQ8TAE6 165 aa15.09■□□□□ 0.01
SMN2-216ENST00000638794 JADE3Q92613 823 aa15.09■□□□□ 0.01
SMN2-216ENST00000638794 FAM120BQ96EK7 910 aaKnown RBP15.09■□□□□ 0.01
SMN2-216ENST00000638794 PERPQ96FX8 193 aa15.09■□□□□ 0.01
SMN2-216ENST00000638794 Q96MF0 132 aa15.09■□□□□ 0.01
SMN2-216ENST00000638794 UBQLN4Q9NRR5 601 aa15.09■□□□□ 0.01
SMN2-216ENST00000638794 SIRT3Q9NTG7 399 aaPredicted RBP15.09■□□□□ 0.01
SMN2-216ENST00000638794 PAQR5Q9NXK6 330 aaPredicted RBP15.09■□□□□ 0.01
SMN2-216ENST00000638794 MID2Q9UJV3 735 aa15.09■□□□□ 0.01
SMN2-216ENST00000638794 A0A0J9YW62 118 aa15.08■□□□□ 0
SMN2-216ENST00000638794 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.08■□□□□ 0
SMN2-216ENST00000638794 H7C1Q1 480 aa15.08■□□□□ 0
SMN2-216ENST00000638794 SCDO00767 359 aa15.08■□□□□ 0
SMN2-216ENST00000638794 CHRNGP07510 517 aa15.08■□□□□ 0
SMN2-216ENST00000638794 BCKDHAP12694 445 aa15.08■□□□□ 0
SMN2-216ENST00000638794 IL11P20809 199 aa15.08■□□□□ 0
SMN2-216ENST00000638794 ASMTP46597 345 aa15.08■□□□□ 0
SMN2-216ENST00000638794 SERPINB4P48594 390 aa15.08■□□□□ 0
SMN2-216ENST00000638794 CD226Q15762 336 aa15.08■□□□□ 0
SMN2-216ENST00000638794 PRSS57Q6UWY2 283 aa15.08■□□□□ 0
SMN2-216ENST00000638794 YTHDF3Q7Z739 585 aaKnown RBP15.08■□□□□ 0
SMN2-216ENST00000638794 MISPQ8IVT2 679 aa15.08■□□□□ 0
SMN2-216ENST00000638794 DDIASQ8IXT1 998 aa15.08■□□□□ 0
SMN2-216ENST00000638794 EIF1ADQ8N9N8 165 aaKnown RBP15.08■□□□□ 0
SMN2-216ENST00000638794 OR2V1Q8NHB1 315 aa15.08■□□□□ 0
SMN2-216ENST00000638794 POC1BQ8TC44 478 aa15.08■□□□□ 0
SMN2-216ENST00000638794 TWIST2Q8WVJ9 160 aa15.08■□□□□ 0
SMN2-216ENST00000638794 MTERF3Q96E29 417 aa15.08■□□□□ 0
SMN2-216ENST00000638794 ARSGQ96EG1 525 aa15.08■□□□□ 0
SMN2-216ENST00000638794 ZCCHC3Q9NUD5 404 aaKnown RBP15.08■□□□□ 0
SMN2-216ENST00000638794 A0A1W2PQD3 144 aa15.07■□□□□ 0
SMN2-216ENST00000638794 PIP5K1BO14986 540 aa15.07■□□□□ 0
SMN2-216ENST00000638794 SCAMP2O15127 329 aaKnown RBP15.07■□□□□ 0
SMN2-216ENST00000638794 KLF4O43474 513 aa15.07■□□□□ 0
SMN2-216ENST00000638794 SYNGR4O95473 234 aa15.07■□□□□ 0
SMN2-216ENST00000638794 LY6G6DO95868 133 aa15.07■□□□□ 0
SMN2-216ENST00000638794 HMGN2P05204 90 aaKnown RBP15.07■□□□□ 0
SMN2-216ENST00000638794 FGF4P08620 206 aa15.07■□□□□ 0
SMN2-216ENST00000638794 PPP3CBP16298 524 aa15.07■□□□□ 0
SMN2-216ENST00000638794 ME2P23368 584 aa15.07■□□□□ 0
SMN2-216ENST00000638794 LCN1P31025 176 aa15.07■□□□□ 0
SMN2-216ENST00000638794 PRIM2P49643 509 aa15.07■□□□□ 0
SMN2-216ENST00000638794 POU6F2P78424 691 aaPredicted RBP15.07■□□□□ 0
SMN2-216ENST00000638794 LASP1Q14847 261 aaKnown RBP15.07■□□□□ 0
SMN2-216ENST00000638794 MLC1Q15049 377 aa15.07■□□□□ 0
SMN2-216ENST00000638794 UGT3A2Q3SY77 523 aa15.07■□□□□ 0
SMN2-216ENST00000638794 BEX5Q5H9J7 111 aa15.07■□□□□ 0
SMN2-216ENST00000638794 HBMQ6B0K9 141 aa15.07■□□□□ 0
SMN2-216ENST00000638794 R3HCC1LQ7Z5L2 792 aaKnown RBP15.07■□□□□ 0
SMN2-216ENST00000638794 B4GALNT2Q8NHY0 566 aa15.07■□□□□ 0
SMN2-216ENST00000638794 CDS1Q92903 461 aa15.07■□□□□ 0
SMN2-216ENST00000638794 CHMP6Q96FZ7 201 aa15.07■□□□□ 0
SMN2-216ENST00000638794 BTBD2Q9BX70 525 aa15.07■□□□□ 0
SMN2-216ENST00000638794 DUSP22Q9NRW4 184 aa15.07■□□□□ 0
SMN2-216ENST00000638794 GLRX2Q9NS18 164 aa15.07■□□□□ 0
SMN2-216ENST00000638794 GIMAP2Q9UG22 337 aa15.07■□□□□ 0
SMN2-216ENST00000638794 ATP6V1HQ9UI12 483 aa15.07■□□□□ 0
SMN2-216ENST00000638794 FREM1Q5H8C1 2179 aa15.07■□□□□ 0
SMN2-216ENST00000638794 USF3Q68DE3 2245 aa15.07■□□□□ 0
SMN2-216ENST00000638794 JMJD1CQ15652 2540 aa15.06■□□□□ 0
SMN2-216ENST00000638794 TRIM64A6NGJ6 449 aa15.06■□□□□ 0
SMN2-216ENST00000638794 TRIM64BA6NI03 449 aa15.06■□□□□ 0
SMN2-216ENST00000638794 FAM171A2A8MVW0 826 aa15.06■□□□□ 0
SMN2-216ENST00000638794 HSPA4LO95757 839 aa15.06■□□□□ 0
SMN2-216ENST00000638794 LINGO3P0C6S8 592 aa15.06■□□□□ 0
SMN2-216ENST00000638794 SHC1P29353 583 aa15.06■□□□□ 0
SMN2-216ENST00000638794 AGTR1P30556 359 aa15.06■□□□□ 0
SMN2-216ENST00000638794 ALDH3A1P30838 453 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms