RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 IFT27Q9BW83 186 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 MCOLN1Q9GZU1 580 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 FGF22Q9HCT0 170 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 MRPL15Q9P015 296 aaKnown RBP13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 RASD1Q9Y272 281 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 KIAA1549LQ6ZVL6 1849 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 POM121BA6NF01 834 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 NOTOA8MTQ0 251 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 ZGLP1P0C6A0 271 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 ZNF322Q6U7Q0 402 aaPredicted RBP13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 ZNF836Q6ZNA1 936 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 RASSF6Q6ZTQ3 369 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 SLC37A3Q8NCC5 494 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 C17orf47Q8NEP4 570 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 OR56A1Q8NGH5 318 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 PATE1Q8WXA2 126 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 ACOT11Q8WXI4 607 aaPredicted RBP13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 GCDHQ92947 438 aaPredicted RBP13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 RIPOR3Q96MK2 946 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 KXD1Q9BQD3 176 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 CDCP1Q9H5V8 836 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 BCL2L10Q9HD36 194 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 FGF20Q9NP95 211 aaPredicted RBP13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 TAS2R7Q9NYW3 318 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 TBC1D29Q9UFV1 150 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 STON1Q9Y6Q2 735 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 BRWD1Q9NSI6 2320 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 KIF26AQ9ULI4 1882 aaPredicted RBP13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 EIF4EP06730 217 aaKnown RBP13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 CEACAM5P06731 702 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 TFPIP10646 304 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 NDUFV2P19404 249 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 TEAD1P28347 426 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 MAGEB1P43366 347 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 PPP3R1P63098 170 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 SLC25A35Q3KQZ1 300 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 FRRS1Q6ZNA5 592 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 ZNF620Q6ZNG0 422 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 PHPT1Q9NRX4 125 aaPredicted RBP13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 RBFOX1Q9NWB1 397 aaKnown RBP13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 NKIRAS2Q9NYR9 191 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 CES1P1Q9UKY3 287 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 LRRN3E7EW58 273 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 INMT-MINDY4F8WBC2 141 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 ERVH48-1M5A8F1 160 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 STK25O00506 426 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 CD3GP09693 182 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 GJA4P35212 333 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 OR12D2P58182 307 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 EOGTQ5NDL2 527 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 FAM205BPQ63HN1 556 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 PPP2R2DQ66LE6 453 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 FAM109BQ6ICB4 259 aaPredicted RBP13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 OR4M1Q8NGD0 313 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 DEDD2Q8WXF8 326 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 OSTF1Q92882 214 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 RFKQ969G6 155 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 PTCHD1Q96NR3 888 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 ZNF559Q9BR84 538 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 RPP25Q9BUL9 199 aaKnown RBP13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 LRRN3Q9H3W5 708 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 UCKL1Q9NWZ5 548 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 NPAP1Q9NZP6 1156 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 TEKT2Q9UIF3 430 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 ZNF443Q9Y2A4 671 aaPredicted RBP13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 MRPS2Q9Y399 296 aaKnown RBP13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 TP53BP1Q12888 1972 aaPredicted RBP13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 TRDV1A0A1B0GX56 115 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 KDM4EB2RXH2 506 aaPredicted RBP13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 ARSBP15848 533 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 PYCR1P32322 319 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 FAPQ12884 760 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 FZD5Q13467 585 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 RPE65Q16518 533 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 CD300LDQ6UXZ3 194 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 ARIH2OSQ8N7S6 290 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 FANK1Q8TC84 345 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 ASB16Q96NS5 453 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 SLX1AQ9BQ83 275 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 ORAI3Q9BRQ5 295 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 ACTRT3Q9BYD9 372 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 ABCG5Q9H222 651 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 ENAMQ9NRM1 1142 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 ACSL5Q9ULC5 683 aa13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.06□□□□□ -0.32
CACNA1A-228ENST00000636610 LOC105369274A0A096LPK9 316 aa13.05□□□□□ -0.32
CACNA1A-228ENST00000636610 CASC3O15234 703 aaKnown RBP13.05□□□□□ -0.32
CACNA1A-228ENST00000636610 P2RX6O15547 441 aa13.05□□□□□ -0.32
CACNA1A-228ENST00000636610 POLR2CP19387 275 aaPredicted RBP13.05□□□□□ -0.32
CACNA1A-228ENST00000636610 PDGFRLQ15198 375 aa13.05□□□□□ -0.32
CACNA1A-228ENST00000636610 MZT2BQ6NZ67 158 aa13.05□□□□□ -0.32
CACNA1A-228ENST00000636610 VN1R4Q7Z5H5 301 aa13.05□□□□□ -0.32
CACNA1A-228ENST00000636610 CEACAM19Q7Z692 300 aa13.05□□□□□ -0.32
CACNA1A-228ENST00000636610 ZAR1Q86SH2 424 aa13.05□□□□□ -0.32
CACNA1A-228ENST00000636610 OR4N4Q8N0Y3 316 aa13.05□□□□□ -0.32
CACNA1A-228ENST00000636610 ZNF485Q8NCK3 441 aa13.05□□□□□ -0.32
CACNA1A-228ENST00000636610 ZNF222Q9UK12 451 aa13.05□□□□□ -0.32
CACNA1A-228ENST00000636610 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.05□□□□□ -0.32
CACNA1A-228ENST00000636610 IMPA2O14732 288 aa13.05□□□□□ -0.32
CACNA1A-228ENST00000636610 CDC123O75794 336 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms