RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 NPBWR2P48146 333 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 LHX1P48742 406 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 NAPAP54920 295 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 UCNP55089 124 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 MTCP1P56278 107 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 GABPAQ06546 454 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 SLC3A1Q07837 685 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 PJVKQ0ZLH3 352 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 SERTAD2Q14140 314 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 CRMP1Q14194 572 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 NR1D2Q14995 579 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 PON3Q15166 354 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 CHI3L2Q15782 390 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 SYPL1Q16563 259 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 C2orf68Q2NKX9 166 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 ZNF699Q32M78 642 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 AGKQ53H12 422 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 BRMS1LQ5PSV4 323 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 WASHC2DQ5SRD0 308 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 HIST2H2BCQ6DN03 193 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 HIST2H2BDQ6DRA6 164 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 FUT10Q6P4F1 479 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 RHBDF2Q6PJF5 856 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 LCTLQ6UWM7 567 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 GDPD4Q6W3E5 623 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 SIGLEC15Q6ZMC9 328 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 Q6ZSV7 163 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 PGAP1Q75T13 922 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 ZNF367Q7RTV3 350 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 SMIM15Q7Z3B0 74 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 LHFPL3Q86UP9 236 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 TGIF2LXQ8IUE1 241 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 TDHQ8IZJ6 230 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 PELI3Q8N2H9 469 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 PARP8Q8N3A8 854 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 ZCCHC9Q8N567 271 aaKnown RBP2.67□□□□□ -1.98
PSPC1-208ENST00000635562 ALLCQ8N6M5 410 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 NATD1Q8N6N6 113 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 NRACQ8N912 160 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 BEST2Q8NFU1 509 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 OR5M8Q8NGP6 311 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 OR1L4Q8NGR5 311 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 ARRDC2Q8TBH0 407 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 WDR20Q8TBZ3 569 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 HM13Q8TCT9 377 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 MCOLN3Q8TDD5 553 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 HCAR2Q8TDS4 363 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 UBTD2Q8WUN7 234 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 RNF133Q8WVZ7 376 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 IFT81Q8WYA0 676 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 RPL3LQ92901 407 aaKnown RBP2.67□□□□□ -1.98
PSPC1-208ENST00000635562 SMARCD2Q92925 531 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 NAT6Q93015 286 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 IGSF8Q969P0 613 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 WBP2Q969T9 261 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 LYZL4Q96KX0 146 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 B3GALT6Q96L58 329 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 NAPGQ99747 312 aaPredicted RBP2.67□□□□□ -1.98
PSPC1-208ENST00000635562 PRMT1Q99873 361 aaKnown RBP2.67□□□□□ -1.98
PSPC1-208ENST00000635562 NICN1Q9BSH3 213 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 LMF2Q9BU23 707 aaKnown RBP2.67□□□□□ -1.98
PSPC1-208ENST00000635562 SLITRK2Q9H156 845 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 ESRP2Q9H6T0 727 aaKnown RBP2.67□□□□□ -1.98
PSPC1-208ENST00000635562 CHMP1AQ9HD42 196 aaPredicted RBP2.67□□□□□ -1.98
PSPC1-208ENST00000635562 DNAJC4Q9NNZ3 241 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 MYNNQ9NPC7 610 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 KRCC1Q9NPI7 259 aaPredicted RBP2.67□□□□□ -1.98
PSPC1-208ENST00000635562 CYSLTR2Q9NS75 346 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 INTS9Q9NV88 658 aaKnown RBP2.67□□□□□ -1.98
PSPC1-208ENST00000635562 ARMC1Q9NVT9 282 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 CMTM6Q9NX76 183 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 TAS2R9Q9NYW1 312 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 USE1Q9NZ43 259 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 STMN3Q9NZ72 180 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 IFNKQ9P0W0 207 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 NYAP2Q9P242 653 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 UVRAGQ9P2Y5 699 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 P2RX2Q9UBL9 471 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 IKZF3Q9UKT9 509 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 RNF150Q9ULK6 438 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 TMCO1Q9UM00 188 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 TNNQ9UQP3 1299 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 SLC22A13Q9Y226 551 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 PRG3Q9Y2Y8 225 aaPredicted RBP2.67□□□□□ -1.98
PSPC1-208ENST00000635562 STARD10Q9Y365 291 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 RNF115Q9Y4L5 304 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 ATG4BQ9Y4P1 393 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 TBL2Q9Y4P3 447 aaKnown RBP2.67□□□□□ -1.98
PSPC1-208ENST00000635562 KLK4Q9Y5K2 254 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 FADS3Q9Y5Q0 445 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 MMP24Q9Y5R2 645 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 MRPS18BQ9Y676 258 aaKnown RBP2.67□□□□□ -1.98
PSPC1-208ENST00000635562 CEPT1Q9Y6K0 416 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 UMODL1Q5DID0 1318 aa2.67□□□□□ -1.98
PSPC1-208ENST00000635562 ATXN2Q99700 1313 aaKnown RBP2.67□□□□□ -1.98
PSPC1-208ENST00000635562 ERCC6Q03468 1493 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 EIF3AQ14152 1382 aaKnown RBP2.66□□□□□ -1.98
PSPC1-208ENST00000635562 PNPLA6Q8IY17 1366 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 JCADQ9P266 1359 aa2.66□□□□□ -1.98
PSPC1-208ENST00000635562 A0A1B0GVL5 298 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms