RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 DNASE1L3Q13609 305 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 EXOSC2Q13868 293 aaKnown RBP4.46□□□□□ -1.7
SDCBP-213ENST00000630925 RNF151Q2KHN1 245 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 TIGD5Q53EQ6 642 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 UTF1Q5T230 341 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 FAM69BQ5VUD6 431 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 FAM71F2Q6NXP2 309 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 TAPT1Q6NXT6 567 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 TEPPQ6URK8 271 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 DPY19L4Q7Z388 723 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 CRLF3Q8IUI8 442 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 MMAAQ8IVH4 418 aaKnown RBP4.46□□□□□ -1.7
SDCBP-213ENST00000630925 GSPT2Q8IYD1 628 aaKnown RBP4.46□□□□□ -1.7
SDCBP-213ENST00000630925 PDIK1LQ8N165 341 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 SPEM1Q8N4L4 309 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 ADPRHL1Q8NDY3 354 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 OR5B17Q8NGF7 314 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 OR2AJ1Q8NGZ0 328 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 FAM172AQ8WUF8 416 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 HAS1Q92839 578 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 HPS1Q92902 700 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 PHF21AQ96BD5 680 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 SYTL4Q96C24 671 aaPredicted RBP4.46□□□□□ -1.7
SDCBP-213ENST00000630925 C10orf35Q96D05 121 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 RAB39BQ96DA2 213 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 MTBPQ96DY7 904 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 ZNF837Q96EG3 531 aaPredicted RBP4.46□□□□□ -1.7
SDCBP-213ENST00000630925 NSMCE3Q96MG7 304 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 FEM1AQ9BSK4 669 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 C16orf70Q9BSU1 422 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 SPRTNQ9H040 489 aaPredicted RBP4.46□□□□□ -1.7
SDCBP-213ENST00000630925 EBF3Q9H4W6 596 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 ACTR5Q9H9F9 607 aaPredicted RBP4.46□□□□□ -1.7
SDCBP-213ENST00000630925 CDH20Q9HBT6 801 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 SIRT7Q9NRC8 400 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 CCNL1Q9UK58 526 aaPredicted RBP4.46□□□□□ -1.7
SDCBP-213ENST00000630925 CACNA1AO00555 2505 aa4.46□□□□□ -1.7
SDCBP-213ENST00000630925 SPTBN5Q9NRC6 3674 aaKnown RBP4.46□□□□□ -1.7
SDCBP-213ENST00000630925 A0A087X1B8 175 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 KBTBD11-OT1A0A1B0GTJ5 212 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 A0A1W2PQ45 241 aaPredicted RBP4.45□□□□□ -1.7
SDCBP-213ENST00000630925 A0A1W2PQY0 241 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 HSPB2A8KAH6 182 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 BET1O15155 118 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 XRCC3O43542 346 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 PLPP2O43688 288 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 PCDH7O60245 1069 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 PEX10O60683 326 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 HUS1O60921 280 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 NOS1APO75052 506 aaPredicted RBP4.45□□□□□ -1.7
SDCBP-213ENST00000630925 RBMXL2O75526 392 aaKnown RBP4.45□□□□□ -1.7
SDCBP-213ENST00000630925 NDUFA7O95182 113 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 OXSR1O95747 527 aaPredicted RBP4.45□□□□□ -1.7
SDCBP-213ENST00000630925 IFNA5P01569 189 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 GUSBP08236 651 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 MELTFP08582 738 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 ALDOCP09972 364 aaKnown RBP4.45□□□□□ -1.7
SDCBP-213ENST00000630925 CD8BP10966 210 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 EPCAMP16422 314 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 PSMC3P17980 439 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 CALCRP30988 508 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 CCKBRP32239 447 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 KIR2DL3P43628 341 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 MTHFSP49914 203 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 ATP1B3P54709 279 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 CLDN15P56746 228 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 CCL7P80098 99 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 ZXDBP98169 803 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 SULT2A1Q06520 285 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 FCHO2Q0JRZ9 810 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 MED21Q13503 144 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 GRB14Q14449 540 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 UBXN2BQ14CS0 331 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 HSPB2Q16082 182 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 CYP1B1Q16678 543 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 ST3GAL2Q16842 350 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 TCTN1Q2MV58 587 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 GGTA1PQ4G0N0 100 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 SFT2D3Q587I9 215 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 WASHC2DQ5SRD0 308 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 MEDAGQ5VYS4 303 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 PLEKHA7Q6IQ23 1121 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 UGT3A1Q6NUS8 523 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 MFSD12Q6NUT3 480 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 NPSR1Q6W5P4 371 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 P4HA3Q7Z4N8 544 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 CHSY1Q86X52 802 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 ZNF808Q8N4W9 903 aaPredicted RBP4.45□□□□□ -1.7
SDCBP-213ENST00000630925 C2orf73Q8N5S3 287 aaPredicted RBP4.45□□□□□ -1.7
SDCBP-213ENST00000630925 SLC5A8Q8N695 610 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 CDRT4Q8N9R6 151 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 SLC38A9Q8NBW4 561 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 OR1L6Q8NGR2 347 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 FAM110BQ8TC76 370 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 CXorf40AQ8TE69 158 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 GTPBP3Q969Y2 492 aaKnown RBP4.45□□□□□ -1.7
SDCBP-213ENST00000630925 C8orf44Q96CB5 159 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 CELF6Q96J87 481 aaKnown RBP4.45□□□□□ -1.7
SDCBP-213ENST00000630925 RNF170Q96K19 258 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 GUCD1Q96NT3 240 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms