RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 NPIPA7E9PJI5 369 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 E9PQ18 207 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 MEN1O00255 615 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 PEX12O00623 359 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 NKX2-8O15522 239 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 FRS3O43559 492 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 HS6ST1O60243 411 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 MITFO75030 526 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 GADD45GO95257 159 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 CLIC3O95833 236 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 ALBP02768 609 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 HEXBP07686 556 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 NPIPA8P0DM63 369 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 THRBP10828 461 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 IL7RP16871 459 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 TCN2P20062 427 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 AGXTP21549 392 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 TRHRP34981 398 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 POLR2IP36954 125 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 PIGAP37287 484 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 CDH12P55289 794 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 EEF1A1P68104 462 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 CDC20Q12834 499 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 KLRB1Q12918 225 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 EPS8Q12929 822 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 GANABQ14697 944 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 PDK3Q15120 406 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 RFX4Q33E94 735 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 KDM4DQ6B0I6 523 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 FAHD1Q6P587 224 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 DHRS4L2Q6PKH6 230 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 CLEC18BQ6UXF7 455 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 DEF8Q6ZN54 512 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 USP51Q70EK9 711 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 OVCH1Q7RTY7 1134 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 ATCAYQ86WG3 371 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 FAM26EQ8N5C1 309 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 DHRSXQ8N5I4 330 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 ESX1Q8N693 406 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 CLEC18CQ8NCF0 446 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 OR14A16Q8NHC5 309 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 FKBP10Q96AY3 582 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 RMND5BQ96G75 393 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 CNBD2Q96M20 576 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 LMF1Q96S06 567 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 SPSB2Q99619 263 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 ARHGDIGQ99819 225 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 PRR14Q9BWN1 585 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 ITPAQ9BY32 194 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 OR8D2Q9GZM6 311 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 PDP1Q9P0J1 537 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 KIF17Q9P2E2 1029 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 C3orf18Q9UK00 162 aa8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 ZNF443Q9Y2A4 671 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-223ENST00000627587 PCDH17O14917 1159 aa8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 UGT2B17O75795 530 aa8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 DBIP07108 87 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 KLK3P07288 261 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 THBS1P07996 1170 aa8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 GPR143P51810 404 aa8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 RAD23AP54725 363 aa8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 NNATQ16517 81 aa8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 EXOC3L2Q2M3D2 409 aa8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 ZIK1Q3SY52 487 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 EIPR1Q53HC9 387 aa8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 ZNF770Q6IQ21 691 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 MRPL14Q6P1L8 145 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 ISLR2Q6UXK2 745 aa8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 ZNF517Q6ZMY9 492 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 ZNF836Q6ZNA1 936 aa8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 TAGAPQ8N103 731 aa8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 ATG16L2Q8NAA4 619 aa8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 OR52J3Q8NH60 311 aa8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 SLC2A12Q8TD20 617 aa8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 CYGBQ8WWM9 190 aa8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 NUDT9Q9BW91 350 aa8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 TOR3AQ9H497 397 aa8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 NMNAT1Q9HAN9 279 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 MAN2C1Q9NTJ4 1040 aa8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 COPS7AQ9UBW8 275 aa8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 OR10H1Q9Y4A9 318 aa8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 PCNX3Q9H6A9 2034 aa8.76□□□□□ -1.01
PDLIM5-223ENST00000627587 PTPN13Q12923 2485 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 TRBV4-1A0A0J9YWV2 114 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 LOC101059948A0A1B0GTJ6 334 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 IDSB3KWA1 339 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 NPIPB9F8W1W9 429 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 THY1P04216 161 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 GUSBP08236 651 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 UBTFL6P0CB48 400 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 IGFBP5P24593 272 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 EPHA2P29317 976 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 CAPGP40121 348 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 RFX3P48380 749 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 CD97P48960 835 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 ZNF136P52737 540 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 SMIM11AP58511 58 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 MYBPC1Q00872 1141 aa8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 PIN1Q13526 163 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-223ENST00000627587 SEC23BQ15437 767 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms