RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 GPR143P51810 404 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 SLC37A1P57057 533 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 COPZ1P61923 177 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 ERV3-1Q14264 604 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 SNAPC1Q16533 368 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 ZNF528Q3MIS6 628 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 MINDY4Q4G0A6 757 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 PDZK1Q5T2W1 519 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 TMEM236Q5W0B7 351 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 HLA-DQA1Q5Y7H0 255 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 TMPRSS11FQ6ZWK6 438 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 HMGN2P46Q86SG4 172 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 NRMQ8IXM6 262 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 BCORP1Q8N888 145 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 B3GNT7Q8NFL0 401 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 OR2T33Q8NG76 320 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 TMEM163Q8TC26 289 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 SGCDQ92629 289 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 YIPF6Q96EC8 236 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 TMEM80Q96HE8 168 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 PLEKHA8Q96JA3 519 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 LCORQ96JN0 433 aaPredicted RBP15.12■□□□□ 0.01
LDB3-208ENST00000623007 LRRN3Q9H3W5 708 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 GAREM1Q9H706 876 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 EXOSC3Q9NQT5 275 aaKnown RBP15.12■□□□□ 0.01
LDB3-208ENST00000623007 CTPS2Q9NRF8 586 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 TBC1D23Q9NUY8 699 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 MRPS18AQ9NVS2 196 aaKnown RBP15.12■□□□□ 0.01
LDB3-208ENST00000623007 TVP23BQ9NYZ1 205 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 RPS6KB2Q9UBS0 482 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 KCNE5Q9UJ90 142 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 RARRES3Q9UL19 164 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 ERGIC3Q9Y282 383 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 MAU2Q9Y6X3 613 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 A0A0C4DFX4 3053 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 SPTBN5Q9NRC6 3674 aaKnown RBP15.11■□□□□ 0.01
LDB3-208ENST00000623007 IGLV3-12A0A075B6K2 115 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 A0A0B4J2E0 115 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 A0A1B0GX12 115 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 SERINC4A6NH21 518 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 PRODHO43272 600 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 SIGLEC6O43699 453 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 IL33O95760 270 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 ONECUT2O95948 504 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 IGF2P01344 180 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 CFIP05156 583 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 FUT4P22083 530 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 OR1D4P47884 311 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 SERPINB10P48595 397 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 EFNB1P98172 346 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 RHAGQ02094 409 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 OCA2Q04671 838 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 PIGFQ07326 219 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 NFATC3Q12968 1075 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 C1DQ13901 141 aaKnown RBP15.11■□□□□ 0.01
LDB3-208ENST00000623007 IRF3Q14653 427 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 SLC23A3Q6PIS1 610 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 ZNF620Q6ZNG0 422 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 BMP8AQ7Z5Y6 402 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 NKAIN4Q8IVV8 208 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 METTL27Q8N6F8 245 aaPredicted RBP15.11■□□□□ 0.01
LDB3-208ENST00000623007 TCEANCQ8N8B7 351 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 PTPMT1Q8WUK0 201 aaPredicted RBP15.11■□□□□ 0.01
LDB3-208ENST00000623007 FAM46AQ96IP4 442 aaKnown RBP15.11■□□□□ 0.01
LDB3-208ENST00000623007 NUDT22Q9BRQ3 303 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 SLC19A3Q9BZV2 496 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 CAPN10Q9HC96 672 aa15.11■□□□□ 0.01
LDB3-208ENST00000623007 PNO1Q9NRX1 252 aaKnown RBP15.11■□□□□ 0.01
LDB3-208ENST00000623007 DNAJB12Q9NXW2 375 aaKnown RBP15.11■□□□□ 0.01
LDB3-208ENST00000623007 COL5A1P20908 1838 aaPredicted RBP15.1■□□□□ 0.01
LDB3-208ENST00000623007 CPED1A4D0V7 1026 aa15.1■□□□□ 0.01
LDB3-208ENST00000623007 PPM1BO75688 479 aa15.1■□□□□ 0.01
LDB3-208ENST00000623007 IGKV3-11P04433 115 aa15.1■□□□□ 0.01
LDB3-208ENST00000623007 CKMT1AP12532 417 aa15.1■□□□□ 0.01
LDB3-208ENST00000623007 PCSK6P29122 969 aa15.1■□□□□ 0.01
LDB3-208ENST00000623007 CSTF2P33240 577 aaKnown RBP eCLIP15.1■□□□□ 0.01
LDB3-208ENST00000623007 MASP1P48740 699 aa15.1■□□□□ 0.01
LDB3-208ENST00000623007 RAB40BQ12829 278 aa15.1■□□□□ 0.01
LDB3-208ENST00000623007 FOXD4Q12950 439 aaPredicted RBP15.1■□□□□ 0.01
LDB3-208ENST00000623007 TMED1Q13445 227 aa15.1■□□□□ 0.01
LDB3-208ENST00000623007 NSDHLQ15738 373 aa15.1■□□□□ 0.01
LDB3-208ENST00000623007 ARMC4Q5T2S8 1044 aa15.1■□□□□ 0.01
LDB3-208ENST00000623007 NPSR1Q6W5P4 371 aa15.1■□□□□ 0.01
LDB3-208ENST00000623007 SLC29A4Q7RTT9 530 aa15.1■□□□□ 0.01
LDB3-208ENST00000623007 HSPBAP1Q96EW2 488 aa15.1■□□□□ 0.01
LDB3-208ENST00000623007 LRFN5Q96NI6 719 aa15.1■□□□□ 0.01
LDB3-208ENST00000623007 PRSS27Q9BQR3 290 aa15.1■□□□□ 0.01
LDB3-208ENST00000623007 FN3KQ9H479 309 aa15.1■□□□□ 0.01
LDB3-208ENST00000623007 CHCHD3Q9NX63 227 aaKnown RBP15.1■□□□□ 0.01
LDB3-208ENST00000623007 GPR83Q9NYM4 423 aa15.1■□□□□ 0.01
LDB3-208ENST00000623007 DHCR7Q9UBM7 475 aaKnown RBP15.1■□□□□ 0.01
LDB3-208ENST00000623007 UNC119BA6NIH7 251 aa15.09■□□□□ 0.01
LDB3-208ENST00000623007 A8MU76 341 aa15.09■□□□□ 0.01
LDB3-208ENST00000623007 SCDO00767 359 aa15.09■□□□□ 0.01
LDB3-208ENST00000623007 TO15178 435 aa15.09■□□□□ 0.01
LDB3-208ENST00000623007 TLX2O43763 284 aaPredicted RBP15.09■□□□□ 0.01
LDB3-208ENST00000623007 HCN1O60741 890 aa15.09■□□□□ 0.01
LDB3-208ENST00000623007 ENTPD6O75354 484 aa15.09■□□□□ 0.01
LDB3-208ENST00000623007 ATE1O95260 518 aa15.09■□□□□ 0.01
LDB3-208ENST00000623007 CSTAP01040 98 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms