RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 POGLUT1Q8NBL1 392 aa16.34■□□□□ 0.21
PTCHD3-202ENST00000622555 OR10G3Q8NGC4 313 aa16.34■□□□□ 0.21
PTCHD3-202ENST00000622555 OR4D11Q8NGI4 311 aa16.34■□□□□ 0.21
PTCHD3-202ENST00000622555 AMBRA1Q9C0C7 1298 aa16.34■□□□□ 0.21
PTCHD3-202ENST00000622555 RYDENQ9NUL5 291 aaKnown RBP16.34■□□□□ 0.21
PTCHD3-202ENST00000622555 ABCG2Q9UNQ0 655 aa16.34■□□□□ 0.21
PTCHD3-202ENST00000622555 FREM2Q5SZK8 3169 aa16.34■□□□□ 0.21
PTCHD3-202ENST00000622555 ALG1L2C9J202 215 aa16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 H3BNH8 94 aa16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 TP53I11O14683 189 aa16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 SCO2O43819 266 aa16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 FADS1O60427 444 aa16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 BCAS1O75363 584 aaPredicted RBP16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 DNAJB5O75953 348 aa16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 DIRAS1O95057 198 aa16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 FASP25445 335 aa16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 EIF2S3P41091 472 aaKnown RBP16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 CLK3P49761 638 aaKnown RBP16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 RGS8P57771 180 aaPredicted RBP16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 RAPSNQ13702 412 aa16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 CD226Q15762 336 aa16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 ZSWIM7Q19AV6 140 aa16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 LPCAT4Q643R3 524 aa16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 DEF8Q6ZN54 512 aa16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 ERMP1Q7Z2K6 904 aa16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 PIWIL3Q7Z3Z3 882 aaKnown RBP16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 MARCH3Q86UD3 253 aa16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 RBM45Q8IUH3 476 aaKnown RBP16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 DND1Q8IYX4 353 aaKnown RBP16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 LILRA2Q8N149 483 aa16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 PHOSPHO1Q8TCT1 267 aa16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 GRHL3Q8TE85 626 aa16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 CNOT9Q92600 299 aaKnown RBP16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 DCBLD2Q96PD2 775 aa16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 PKP2Q99959 881 aa16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 HPF1Q9NWY4 346 aa16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 STMN3Q9NZ72 180 aa16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 NDUFAF4Q9P032 175 aa16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 SLC35A3Q9Y2D2 325 aa16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 URB1O60287 2271 aaKnown RBP16.33■□□□□ 0.21
PTCHD3-202ENST00000622555 HEATR5AQ86XA9 2040 aa16.33■□□□□ 0.2
PTCHD3-202ENST00000622555 CACNA1AO00555 2505 aa16.33■□□□□ 0.2
PTCHD3-202ENST00000622555 A0A1W2PQD3 144 aa16.33■□□□□ 0.2
PTCHD3-202ENST00000622555 GTPBP1O00178 669 aaKnown RBP16.33■□□□□ 0.2
PTCHD3-202ENST00000622555 RRP8O43159 456 aaKnown RBP16.33■□□□□ 0.2
PTCHD3-202ENST00000622555 CST1P01037 141 aa16.33■□□□□ 0.2
PTCHD3-202ENST00000622555 UBTFL6P0CB48 400 aaPredicted RBP16.33■□□□□ 0.2
PTCHD3-202ENST00000622555 ITGA2P17301 1181 aa16.33■□□□□ 0.2
PTCHD3-202ENST00000622555 PEX2P28328 305 aa16.33■□□□□ 0.2
PTCHD3-202ENST00000622555 YAP1P46937 504 aaKnown RBP16.33■□□□□ 0.2
PTCHD3-202ENST00000622555 BLMHQ13867 455 aa16.33■□□□□ 0.2
PTCHD3-202ENST00000622555 FNDC7Q5VTL7 733 aa16.33■□□□□ 0.2
PTCHD3-202ENST00000622555 CCDC81Q6ZN84 652 aa16.33■□□□□ 0.2
PTCHD3-202ENST00000622555 AMIGO2Q86SJ2 522 aa16.33■□□□□ 0.2
PTCHD3-202ENST00000622555 OR6T1Q8NGN1 323 aa16.33■□□□□ 0.2
PTCHD3-202ENST00000622555 METTL7AQ9H8H3 244 aa16.33■□□□□ 0.2
PTCHD3-202ENST00000622555 AGPAT4Q9NRZ5 378 aa16.33■□□□□ 0.2
PTCHD3-202ENST00000622555 DNAJB12Q9NXW2 375 aaKnown RBP16.33■□□□□ 0.2
PTCHD3-202ENST00000622555 GPR83Q9NYM4 423 aa16.33■□□□□ 0.2
PTCHD3-202ENST00000622555 ABI3Q9P2A4 366 aa16.33■□□□□ 0.2
PTCHD3-202ENST00000622555 FAM32AQ9Y421 112 aaKnown RBP16.33■□□□□ 0.2
PTCHD3-202ENST00000622555 ENPP4Q9Y6X5 453 aa16.33■□□□□ 0.2
PTCHD3-202ENST00000622555 CNTRLQ7Z7A1 2325 aa16.33■□□□□ 0.2
PTCHD3-202ENST00000622555 NDUFB5O43674 189 aa16.32■□□□□ 0.2
PTCHD3-202ENST00000622555 CYP7B1O75881 506 aa16.32■□□□□ 0.2
PTCHD3-202ENST00000622555 LDLRP01130 860 aa16.32■□□□□ 0.2
PTCHD3-202ENST00000622555 GKN3PP0CG01 181 aa16.32■□□□□ 0.2
PTCHD3-202ENST00000622555 UBL4AP11441 157 aa16.32■□□□□ 0.2
PTCHD3-202ENST00000622555 ADH7P40394 386 aa16.32■□□□□ 0.2
PTCHD3-202ENST00000622555 SOX8P57073 446 aa16.32■□□□□ 0.2
PTCHD3-202ENST00000622555 HOXC5Q00444 222 aa16.32■□□□□ 0.2
PTCHD3-202ENST00000622555 PLAURQ03405 335 aa16.32■□□□□ 0.2
PTCHD3-202ENST00000622555 TRIP10Q15642 601 aa16.32■□□□□ 0.2
PTCHD3-202ENST00000622555 ATP6AP1Q15904 470 aa16.32■□□□□ 0.2
PTCHD3-202ENST00000622555 NDUFAF6Q330K2 333 aa16.32■□□□□ 0.2
PTCHD3-202ENST00000622555 IQCCQ4KMZ1 466 aa16.32■□□□□ 0.2
PTCHD3-202ENST00000622555 ZNF468Q5VIY5 522 aaPredicted RBP16.32■□□□□ 0.2
PTCHD3-202ENST00000622555 TSEN54Q7Z6J9 526 aaKnown RBP16.32■□□□□ 0.2
PTCHD3-202ENST00000622555 GRAMD2AQ8IUY3 354 aa16.32■□□□□ 0.2
PTCHD3-202ENST00000622555 ZNF300Q96RE9 604 aaPredicted RBP16.32■□□□□ 0.2
PTCHD3-202ENST00000622555 RTN4RQ9BZR6 473 aa16.32■□□□□ 0.2
PTCHD3-202ENST00000622555 SEMA6AQ9H2E6 1030 aa16.32■□□□□ 0.2
PTCHD3-202ENST00000622555 ANKRD10Q9NXR5 420 aa16.32■□□□□ 0.2
PTCHD3-202ENST00000622555 KLRF1Q9NZS2 232 aa16.32■□□□□ 0.2
PTCHD3-202ENST00000622555 SSUH2Q9Y2M2 353 aa16.32■□□□□ 0.2
PTCHD3-202ENST00000622555 NCOR2Q9Y618 2525 aa16.32■□□□□ 0.2
PTCHD3-202ENST00000622555 GNGT2O14610 69 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 CLOCKO15516 846 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 DEAF1O75398 565 aaPredicted RBP16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 ANGPTL1O95841 491 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 CCL11P51671 97 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 RPP38P78345 283 aaKnown RBP16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 NPTX1Q15818 432 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 AGAP7PQ5VUJ5 663 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 BICRALQ6AI39 1079 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 HMBOX1Q6NT76 420 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 LINC00696Q6ZRV3 163 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 AGAP4Q96P64 663 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 EVA1AQ9H8M9 152 aa16.31■□□□□ 0.2
PTCHD3-202ENST00000622555 DNAJB9Q9UBS3 223 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms