RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 GFAPP14136 432 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 CPMP14384 443 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 PORP16435 677 aaPredicted RBP7.07□□□□□ -1.28
CLK1-215ENST00000621181 ZNF708P17019 499 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 ATP5F1P24539 256 aaPredicted RBP7.07□□□□□ -1.28
CLK1-215ENST00000621181 CCKARP32238 428 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 PTGDSP41222 190 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 NUDT2P50583 147 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 NEK2P51955 445 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 ROR2Q01974 943 aaKnown RBP7.07□□□□□ -1.28
CLK1-215ENST00000621181 EXOSC7Q15024 291 aaKnown RBP7.07□□□□□ -1.28
CLK1-215ENST00000621181 PFKFB4Q16877 469 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 LIN52Q52LA3 116 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 OR5M10Q6IEU7 315 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 C8orf82Q6P1X6 216 aaPredicted RBP7.07□□□□□ -1.28
CLK1-215ENST00000621181 ZFP1Q6P2D0 407 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 VWA1Q6PCB0 445 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 PLEKHM3Q6ZWE6 761 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 ZNF550Q7Z398 422 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 PLCZ1Q86YW0 608 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 UBQLNLQ8IYU4 475 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 AGR3Q8TD06 166 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 HGDQ93099 445 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 CTHRC1Q96CG8 243 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 TMCO6Q96DC7 493 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 STARD4Q96DR4 205 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 LCORQ96JN0 433 aaPredicted RBP7.07□□□□□ -1.28
CLK1-215ENST00000621181 CDRT15Q96T59 188 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 OPN3Q9H1Y3 402 aaPredicted RBP7.07□□□□□ -1.28
CLK1-215ENST00000621181 VCX3BQ9H321 246 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 PAPOLBQ9NRJ5 636 aaKnown RBP7.07□□□□□ -1.28
CLK1-215ENST00000621181 FBXL2Q9UKC9 423 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 WIF1Q9Y5W5 379 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 ABCA1O95477 2261 aa7.07□□□□□ -1.28
CLK1-215ENST00000621181 FOXE1O00358 373 aaPredicted RBP7.06□□□□□ -1.28
CLK1-215ENST00000621181 SMIM24O75264 130 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 CRLF1O75462 422 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 ERAL1O75616 437 aaKnown RBP7.06□□□□□ -1.28
CLK1-215ENST00000621181 REM1O75628 298 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 KLK1P06870 262 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 NID1P14543 1247 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 S1PR1P21453 382 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 SRD5A2P31213 254 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 PIK3CGP48736 1102 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 PCYT1AP49585 367 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 CLDN18P56856 261 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 SIRPAP78324 504 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 HMGCS1Q01581 520 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 GALNT1Q10472 559 aaPredicted RBP7.06□□□□□ -1.28
CLK1-215ENST00000621181 PDK3Q15120 406 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 TRIP10Q15642 601 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 CCNYL2Q5T2Q4 361 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 ZNF474Q6S9Z5 364 aaPredicted RBP7.06□□□□□ -1.28
CLK1-215ENST00000621181 PAGE2Q7Z2X7 111 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 BTLAQ7Z6A9 289 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 MEIOBQ8N635 442 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 ADCY4Q8NFM4 1077 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 TMEM171Q8WVE6 324 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 DUS3LQ96G46 650 aaKnown RBP7.06□□□□□ -1.28
CLK1-215ENST00000621181 ZNF845Q96IR2 970 aaPredicted RBP7.06□□□□□ -1.28
CLK1-215ENST00000621181 SERPINI1Q99574 410 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 IPPKQ9H8X2 491 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 MEAF6Q9HAF1 191 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 ELOVL5Q9NYP7 299 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 UBAP1Q9NZ09 502 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 A8MT66 165 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 RNF212BA8MTL3 300 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 STX16-NPEPL1H3BU86 382 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 FBP2O00757 339 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 SEMA3DO95025 777 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 ATP1B1P05026 303 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 C8BP07358 591 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 MTHFD2P13995 350 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 DPP4P27487 766 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 KRT20P35900 424 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 FEN1P39748 380 aaKnown RBP7.06□□□□□ -1.28
CLK1-215ENST00000621181 CHN2P52757 468 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 MAPK12P53778 367 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 PKNOX1P55347 436 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 ATP5J2P56134 94 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 MED21Q13503 144 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 GTF2H2Q13888 395 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 LRRC36Q1X8D7 754 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 PRICKLE4Q2TBC4 344 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 CNPY1Q3B7I2 92 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 ANKRD34AQ69YU3 496 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 GTF2H2CQ6P1K8 395 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 FAM111BQ6SJ93 734 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 GOLGA7Q7Z5G4 137 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 HIPK4Q8NE63 616 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 OR52R1Q8NGF1 315 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 WDR20Q8TBZ3 569 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 TMBIM1Q969X1 311 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 ATP6V1E2Q96A05 226 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 COL21A1Q96P44 957 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 ADOQ96SZ5 270 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 PINK1Q9BXM7 581 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 MRPL1Q9BYD6 325 aaKnown RBP7.06□□□□□ -1.28
CLK1-215ENST00000621181 GSTO2Q9H4Y5 243 aa7.06□□□□□ -1.28
CLK1-215ENST00000621181 EFCAB1Q9HAE3 211 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms