RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 DGAT2Q96PD7 388 aa11.48□□□□□ -0.57
TNFAIP3-211ENST00000621150 FEVQ99581 238 aa11.48□□□□□ -0.57
TNFAIP3-211ENST00000621150 PITX2Q99697 317 aa11.48□□□□□ -0.57
TNFAIP3-211ENST00000621150 NMNAT1Q9HAN9 279 aaPredicted RBP11.48□□□□□ -0.57
TNFAIP3-211ENST00000621150 FOLH1BQ9HBA9 442 aa11.48□□□□□ -0.57
TNFAIP3-211ENST00000621150 ZNF304Q9HCX3 659 aa11.48□□□□□ -0.57
TNFAIP3-211ENST00000621150 MAN2C1Q9NTJ4 1040 aa11.48□□□□□ -0.57
TNFAIP3-211ENST00000621150 RLIMQ9NVW2 624 aa11.48□□□□□ -0.57
TNFAIP3-211ENST00000621150 FBXO34Q9NWN3 711 aa11.48□□□□□ -0.57
TNFAIP3-211ENST00000621150 NDRG4Q9ULP0 352 aaKnown RBP11.48□□□□□ -0.57
TNFAIP3-211ENST00000621150 SRPK3Q9UPE1 567 aa11.48□□□□□ -0.57
TNFAIP3-211ENST00000621150 DTX4Q9Y2E6 619 aa11.48□□□□□ -0.57
TNFAIP3-211ENST00000621150 GPR55Q9Y2T6 319 aaPredicted RBP11.48□□□□□ -0.57
TNFAIP3-211ENST00000621150 WDR45Q9Y484 360 aa11.48□□□□□ -0.57
TNFAIP3-211ENST00000621150 SPEF1Q9Y4P9 236 aa11.48□□□□□ -0.57
TNFAIP3-211ENST00000621150 HEMK1Q9Y5R4 338 aaPredicted RBP11.48□□□□□ -0.57
TNFAIP3-211ENST00000621150 LOC100130705A0A1B0GUX0 176 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 A0A1W2PRQ8 180 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 TCRBV16S1A1N1A0A5B0 115 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 GXYLT2A0PJZ3 443 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 DPPA5A6NC42 116 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 STX11O75558 287 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 GADD45GO95257 159 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 HTR3BO95264 441 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 ANXA8P13928 327 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 ALAS2P22557 587 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 ETV5P41161 510 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 CLK3P49761 638 aaKnown RBP11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 ISL1P61371 349 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 IL18R1Q13478 541 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 DGCR6Q14129 220 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 KEAP1Q14145 624 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 MAPK14Q16539 360 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 ZNF311Q5JNZ3 666 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 CCNJQ5T5M9 372 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 PHF19Q5T6S3 580 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 NUP210LQ5VU65 1888 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 ZNF691Q5VV52 312 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 ISLR2Q6UXK2 745 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 NPSR1Q6W5P4 371 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 ZNF619Q8N2I2 560 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 CLIP4Q8N3C7 705 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 SLC38A9Q8NBW4 561 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 OR52P1PQ8NH57 321 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 PTPMT1Q8WUK0 201 aaPredicted RBP11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 PIK3R3Q92569 461 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 CMKLR1Q99788 373 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 FANCEQ9HB96 536 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 CCDC88CQ9P219 2028 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 PISDQ9UG56 409 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 MKLN1Q9UL63 735 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 ZNF443Q9Y2A4 671 aaPredicted RBP11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 SLC9A8Q9Y2E8 581 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 IFT52Q9Y366 437 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 FAM32AQ9Y421 112 aaKnown RBP11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 TENM4Q6N022 2769 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 SDK2Q58EX2 2172 aa11.47□□□□□ -0.57
TNFAIP3-211ENST00000621150 TRAV20A0A0B4J274 112 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 TRBV4-1A0A0J9YWV2 114 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 K7ENP7 123 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 PRAMEF2O60811 474 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 C1QL1O75973 258 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 KCNK2O95069 426 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 TIAF1O95411 115 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 IGKV3-11P04433 115 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 TFAP2AP05549 437 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 CT45A8P0DMV1 189 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 CT45A9P0DMV2 189 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 FBLP22087 321 aaKnown RBP11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 ELAVL4P26378 380 aaKnown RBP11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 EPHA2P29317 976 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 RYKP34925 604 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 TRHRP34981 398 aaPredicted RBP11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 POU6F2P78424 691 aaPredicted RBP11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 GANABQ14697 944 aaKnown RBP11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 SEC23BQ15437 767 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 CT45A2Q5DJT8 189 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 INO80CQ6PI98 192 aaPredicted RBP11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 ZAR1Q86SH2 424 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 PARP8Q8N3A8 854 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 COX18Q8N8Q8 333 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 RCBTB1Q8NDN9 531 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 OR9Q2Q8NGE9 314 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 OR52J3Q8NH60 311 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 C16orf52Q8NHV5 167 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 VANGL1Q8TAA9 524 aaPredicted RBP11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 TSLPQ969D9 159 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 FKBP10Q96AY3 582 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 PRRC1Q96M27 445 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 ALPK1Q96QP1 1244 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 NIPSNAP1Q9BPW8 284 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 YTHDF1Q9BYJ9 559 aaKnown RBP11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 KRT84Q9NSB2 600 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 RHCGQ9UBD6 479 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 MYRFQ9Y2G1 1151 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 SEC16AO15027 2179 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 ZNF462Q96JM2 2506 aa11.46□□□□□ -0.57
TNFAIP3-211ENST00000621150 BSNQ9UPA5 3926 aa11.46□□□□□ -0.58
TNFAIP3-211ENST00000621150 TTC36A6NLP5 189 aa11.46□□□□□ -0.58
TNFAIP3-211ENST00000621150 NPIPB9F8W1W9 429 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms