RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 SNAPC1Q16533 368 aa9.21□□□□□ -0.94
VTA1-205ENST00000620996 OR7G1Q8NGA0 311 aa9.21□□□□□ -0.94
VTA1-205ENST00000620996 C16orf52Q8NHV5 167 aa9.21□□□□□ -0.94
VTA1-205ENST00000620996 ADAMTS18Q8TE60 1221 aa9.21□□□□□ -0.94
VTA1-205ENST00000620996 FBLIM1Q8WUP2 373 aa9.21□□□□□ -0.94
VTA1-205ENST00000620996 FAR1Q8WVX9 515 aa9.21□□□□□ -0.94
VTA1-205ENST00000620996 IPCEF1Q8WWN9 437 aaPredicted RBP9.21□□□□□ -0.94
VTA1-205ENST00000620996 GGHQ92820 318 aa9.21□□□□□ -0.94
VTA1-205ENST00000620996 EFHD2Q96C19 240 aaPredicted RBP9.21□□□□□ -0.94
VTA1-205ENST00000620996 FUNDC2Q9BWH2 189 aa9.21□□□□□ -0.94
VTA1-205ENST00000620996 REV1Q9UBZ9 1251 aa9.21□□□□□ -0.94
VTA1-205ENST00000620996 DAPK2Q9UIK4 370 aa9.21□□□□□ -0.94
VTA1-205ENST00000620996 RP1P56715 2156 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 ENTPD6O75354 484 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 SLITRK5O94991 958 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 NID1P14543 1247 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 HPGDP15428 266 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 EMDP50402 254 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 ST13P50502 369 aaKnown RBP9.2□□□□□ -0.94
VTA1-205ENST00000620996 CXCR4P61073 352 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 PSG6Q00889 435 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 NDUFAF6Q330K2 333 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 CCDC157Q569K6 752 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 UBE2UQ5VVX9 321 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 SIGIRRQ6IA17 410 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 ZCCHC12Q6PEW1 402 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 PRR22Q8IZ63 422 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 ESX1Q8N693 406 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 B3GNT7Q8NFL0 401 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 CNOT9Q92600 299 aaKnown RBP9.2□□□□□ -0.94
VTA1-205ENST00000620996 MUL1Q969V5 352 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 TUBA1CQ9BQE3 449 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 DUSP21Q9H596 190 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 ZNF304Q9HCX3 659 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 KCNE5Q9UJ90 142 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 GPR52Q9Y2T5 361 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 CSNK1G3Q9Y6M4 447 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 FRYLO94915 3013 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 CLCA1A8K7I4 914 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 H0YIG0 161 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 CDK2AP1O14519 115 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 KIAA0513O60268 411 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 SEC14L2O76054 403 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 APOL3O95236 402 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 CRYZL1O95825 349 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 AK1P00568 194 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 GIMD1P0DJR0 217 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 CCNA2P20248 432 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 GP2P55259 537 aaKnown RBP9.2□□□□□ -0.94
VTA1-205ENST00000620996 HSD17B7P56937 341 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 EEF1A1P68104 462 aaKnown RBP9.2□□□□□ -0.94
VTA1-205ENST00000620996 NSDHLQ15738 373 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 PHF19Q5T6S3 580 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 TMEM151BQ8IW70 566 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 ZNF321PQ8N8H1 164 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 MORN4Q8NDC4 146 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 GNPDA2Q8TDQ7 276 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 DIO2Q92813 273 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 CTHRC1Q96CG8 243 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 PLA2G12AQ9BZM1 189 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 SMOC1Q9H4F8 434 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 ERVMER34-1Q9H9K5 563 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 MKL2Q9ULH7 1088 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 SATB2Q9UPW6 733 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 CDC14CA4D256 554 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 BRINP1O60477 761 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 IGKV1D-16P01601 117 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 DCKP27707 260 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 GPR3P46089 330 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 OR1Q1Q15612 314 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 PLK5Q496M5 336 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 PRSS48Q7RTY5 328 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 ERI1Q8IV48 349 aaKnown RBP9.2□□□□□ -0.94
VTA1-205ENST00000620996 SENP5Q96HI0 755 aaPredicted RBP9.2□□□□□ -0.94
VTA1-205ENST00000620996 LMF1Q96S06 567 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 ACOT13Q9NPJ3 140 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 NLGN3Q9NZ94 848 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 PSORS1C1Q9UIG5 152 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 SPEF1Q9Y4P9 236 aa9.2□□□□□ -0.94
VTA1-205ENST00000620996 SEC16AO15027 2179 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 NKX2-2O95096 273 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 SAGP10523 405 aaPredicted RBP9.19□□□□□ -0.94
VTA1-205ENST00000620996 JUNBP17275 347 aaPredicted RBP9.19□□□□□ -0.94
VTA1-205ENST00000620996 FUT1P19526 365 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 ITIH1P19827 911 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 PCMT1P22061 227 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 CCL7P80098 99 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 ILKQ13418 452 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 SERTAD2Q14140 314 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 MED22Q15528 200 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 CEP78Q5JTW2 689 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 PRPF38BQ5VTL8 546 aaKnown RBP9.19□□□□□ -0.94
VTA1-205ENST00000620996 SLC30A6Q6NXT4 461 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 NPSR1Q6W5P4 371 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 HSDL2Q6YN16 418 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 LINC00471Q8N535 108 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 PSD4Q8NDX1 1056 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 WDR36Q8NI36 951 aaKnown RBP9.19□□□□□ -0.94
VTA1-205ENST00000620996 ACOT11Q8WXI4 607 aaPredicted RBP9.19□□□□□ -0.94
VTA1-205ENST00000620996 OR6C1Q96RD1 312 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms